Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 RPL11P4-201ENST00000332269 436 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 RNA5SP485-201ENST00000365053 119 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 RNU6-549P-201ENST00000384433 107 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 RNU6-253P-201ENST00000384730 105 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 YWHAZP4-201ENST00000392459 708 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 GTF2IP23-201ENST00000423746 351 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 FO393419.3-201ENST00000428741 282 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC092170.1-201ENST00000440211 356 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 OR13K1P-201ENST00000444577 975 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 UBE2V1P7-201ENST00000446395 340 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 ZNF619P1-201ENST00000446539 752 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AL157827.1-201ENST00000447622 132 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC097359.1-201ENST00000447946 463 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 FAR2P1-206ENST00000449736 709 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 SNRPGP9-201ENST00000456025 225 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 H3F3AP5-201ENST00000475267 429 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 MARK2P8-201ENST00000476069 952 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC126182.1-201ENST00000478134 357 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC135999.1-201ENST00000478962 479 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 RN7SL714P-201ENST00000487050 298 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC010587.2-201ENST00000511727 448 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC025881.1-201ENST00000518851 512 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 OR4A43P-201ENST00000532938 908 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC084757.1-201ENST00000559987 490 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC016769.4-201ENST00000616893 535 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AL122023.1-201ENST00000622847 530 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 PSG10P-201ENST00000501199 1500 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 AC073055.1-201ENST00000456901 1621 ntBASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.62□□□□□ -1.51
SEC61A2Q9H9S3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 RNU6-931P-201ENST00000363850 107 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 RN7SKP250-201ENST00000363924 321 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC093719.1-202ENST00000392735 373 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AL035419.1-201ENST00000397037 564 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 HMGB3P18-201ENST00000406327 590 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 RNA5SP115-201ENST00000411160 107 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 CYP4F30P-202ENST00000420048 405 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 FNDC3CP-201ENST00000420795 1155 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 AC006065.1-201ENST00000422539 802 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 PDZK1P1-202ENST00000425209 1350 ntBASIC5.61□□□□□ -1.51
SEC61A2Q9H9S3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 466.9 ms