Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 TMBIM7P-201ENST00000418074 855 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 AF186996.5-201ENST00000418098 904 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 DDX39BP1-205ENST00000422507 192 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 TPT1P12-201ENST00000448968 492 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 AC007537.2-201ENST00000472093 511 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 COX6B1P5-201ENST00000509843 249 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 RNA5SP392-201ENST00000516905 112 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 RN7SKP260-201ENST00000516907 149 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 OR8A2P-201ENST00000528631 952 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 OR7E128P-201ENST00000532736 1024 ntBASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
UPF3BQ9BZI7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 MIR192-201ENST00000384915 110 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 NPM1P40-201ENST00000412758 733 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 RGS17P1-201ENST00000423358 553 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 C4BPAP2-201ENST00000428434 478 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 USP9YP9-201ENST00000429406 715 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 FTLP19-201ENST00000433300 394 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 OR7E125P-201ENST00000443450 846 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 NDUFA5P8-201ENST00000449019 346 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 RHEBP2-201ENST00000450289 600 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 RPS3AP41-201ENST00000462701 778 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 OR2A3P-201ENST00000493774 953 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 MRPS33P2-201ENST00000507850 322 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 BNIP3P1-201ENST00000547295 580 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 NMNAT1P1-201ENST00000554095 876 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 AC116158.1-201ENST00000560231 2129 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 AL022401.1-201ENST00000619498 108 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 LINC01739-205ENST00000641890 573 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 AL672167.1-203ENST00000641299 2975 ntBASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
UPF3BQ9BZI7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 RNU4-4P-201ENST00000364588 130 ntBASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 SNORA62-201ENST00000365493 153 ntBASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 AC104837.2-201ENST00000427236 424 ntBASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 RBMY2QP-201ENST00000429799 1147 ntBASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 RPS26P4-201ENST00000431743 355 ntBASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 AC000111.2-201ENST00000448200 210 ntBASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 AC063949.1-201ENST00000552900 865 ntBASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 EDDM3DP-201ENST00000554692 434 ntBASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 AL023583.1-201ENST00000607518 1143 ntBASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.84□□□□□ -1.47
UPF3BQ9BZI7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
UPF3BQ9BZI7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.84□□□□□ -1.48
UPF3BQ9BZI7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms