Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP3-1Q9BYR8 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
KRTAP3-1Q9BYR8 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
KRTAP3-1Q9BYR8 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP3-1Q9BYR8 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP3-1Q9BYR8 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC016251.1-201ENST00000624299 4198 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC007012.2-201ENST00000623206 1676 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 PRYP4-201ENST00000306589 444 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 KRTAP22-1-201ENST00000334680 296 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MIR425-201ENST00000362162 87 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 Y_RNA.291-201ENST00000364886 113 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 RNU4-8P-201ENST00000364936 141 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 SNORD14.1-201ENST00000365609 90 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MT-TW-201ENST00000387382 68 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 SNORA48.6-201ENST00000391156 130 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL136372.1-201ENST00000403060 228 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL583834.1-201ENST00000406943 343 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 PRELID1P2-201ENST00000407805 396 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL121999.1-201ENST00000420156 332 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL590135.1-201ENST00000422215 156 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC116050.1-206ENST00000423774 213 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL353779.2-201ENST00000424917 308 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 RPL7P46-201ENST00000425129 740 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC022022.1-201ENST00000430304 178 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL132765.1-201ENST00000434165 553 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 CEACAMP9-201ENST00000442990 513 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC005229.2-201ENST00000456995 399 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 PRELID3BP1-201ENST00000457142 540 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 RPS3AP41-201ENST00000462701 778 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 RPL21P93-201ENST00000480465 489 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC009269.1-202ENST00000484381 469 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC011005.2-201ENST00000487324 359 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC068305.1-201ENST00000497406 726 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 HMGB1P35-201ENST00000503360 598 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC104806.1-201ENST00000508720 308 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 MTND1P19-201ENST00000511780 315 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC021146.3-201ENST00000511911 260 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 RPL23AP96-201ENST00000514593 591 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 CYCSP22-201ENST00000517555 339 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 IGHVII-51-2-201ENST00000519778 259 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 TMEM107-209ENST00000533070 726 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 HSPE1P20-201ENST00000538133 289 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AL049779.3-201ENST00000557141 606 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC012414.3-201ENST00000559621 748 ntTSL 5 BASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC137800.1-202ENST00000562098 446 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 APOOP5-202ENST00000564761 566 ntBASIC4.14□□□□□ -1.75
KRTAP3-1Q9BYR8 AC012186.1-201ENST00000566702 398 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms