Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC28BQ9BUN5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC28BQ9BUN5 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CCDC28BQ9BUN5 MTND4P26-201ENST00000415971 1359 ntBASIC4.86□□□□□ -1.63
CCDC28BQ9BUN5 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC28BQ9BUN5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCDC28BQ9BUN5 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCDC28BQ9BUN5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
CCDC28BQ9BUN5 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC28BQ9BUN5 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC087190.4-201ENST00000574616 8334 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 OR10J6P-201ENST00000289731 930 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 OR5T3-201ENST00000303059 1023 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 MIR448-201ENST00000362131 111 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 RNU1-20P-201ENST00000363314 162 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 RN7SKP224-201ENST00000364140 325 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 SNORD96B-201ENST00000386148 79 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 ATP5HP3-201ENST00000396994 486 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 LYPLA1P3-201ENST00000402650 695 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AL136116.2-201ENST00000404020 785 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 MORN2-202ENST00000409077 465 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 RPS27P18-201ENST00000431701 247 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 RSL24D1P8-201ENST00000434442 492 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 DNAJA1P5-201ENST00000440278 943 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 RPS29P9-201ENST00000440360 171 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC073052.1-201ENST00000440417 714 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC100832.1-201ENST00000471945 383 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 OR2A3P-201ENST00000493774 953 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 IGKV2-4-201ENST00000523070 340 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AP003168.1-201ENST00000530091 307 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC104687.2-201ENST00000604442 342 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 GMCL1P2-201ENST00000605230 823 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC026979.4-201ENST00000606555 645 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AL096712.1-201ENST00000614561 159 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 CYP4F35P-202ENST00000636121 390 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AC235565.1-201ENST00000456962 1325 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 AL359922.3-201ENST00000624779 1670 ntBASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC28BQ9BUN5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 PANDAR-201ENST00000629595 1506 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 VN2R3P-201ENST00000422626 1412 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AC009643.2-201ENST00000603543 1448 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 Y_RNA.62-201ENST00000362840 99 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AL353625.1-202ENST00000366273 571 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 DHFRP5-201ENST00000406944 564 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 SNORA77-201ENST00000408716 125 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AL390774.1-201ENST00000411924 246 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 SDHDP6-201ENST00000414693 480 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 MTND4LP21-201ENST00000415303 295 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 PTP4A1P1-201ENST00000420539 515 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AL133325.1-201ENST00000421090 382 ntBASIC4.84□□□□□ -1.63
CCDC28BQ9BUN5 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms