Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 OR7E157P-201ENST00000494376 911 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC104109.1-201ENST00000498563 436 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 MTCO1P31-201ENST00000506355 492 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC090424.1-201ENST00000535243 736 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC010547.6-201ENST00000571789 193 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 FAM60CP-201ENST00000591086 664 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AL133247.2-201ENST00000603236 482 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC079610.2-201ENST00000604818 690 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC007349.4-201ENST00000608114 532 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC126175.1-201ENST00000617041 758 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 U6.42-201ENST00000618440 107 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-368P-201ENST00000620928 107 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-538P-201ENST00000622329 107 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 MIR4302-201ENST00000638058 60 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 CASC19-281ENST00000642118 1554 ntBASIC6.06□□□□□ -1.44
CDK5RAP1Q96SZ6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC087516.1-201ENST00000561236 2428 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 TMSB4XP4-201ENST00000323496 618 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 MIR323A-201ENST00000362199 86 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 OR5H15-201ENST00000383696 930 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-468P-201ENST00000384003 109 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-636P-201ENST00000384598 107 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 RN7SKP286-201ENST00000410894 299 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 HMGB1P49-201ENST00000418882 569 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 MTATP6P13-201ENST00000438531 667 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 BX679664.2-201ENST00000439282 283 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AL161722.1-201ENST00000446972 1032 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 RN7SL273P-201ENST00000481561 299 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC108157.1-201ENST00000510511 539 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 RNU6-759P-201ENST00000516740 103 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 SCARNA6.1-201ENST00000516989 238 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AP004247.1-201ENST00000531556 1289 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC012146.2-201ENST00000576545 416 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC015802.2-201ENST00000589690 189 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AL356055.1-201ENST00000602528 446 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 LARP7P1-201ENST00000605576 316 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 NANOGP3-201ENST00000605855 286 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC018755.4-201ENST00000619715 454 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 TET1P1-201ENST00000426627 2301 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 ECM1P2-201ENST00000503354 1577 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 AC092070.2-203ENST00000598377 3644 ntBASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CDK5RAP1Q96SZ6 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK5RAP1Q96SZ6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms