Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VMP1Q96GC9 LINC02210-201ENST00000444561 288 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 AP000547.1-201ENST00000454360 617 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 MTCO1P31-201ENST00000506355 492 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 AC098976.1-201ENST00000513014 541 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 NDUFB4P12-201ENST00000513465 390 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 MRPS21P7-201ENST00000566937 238 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 MIR1273E-201ENST00000581165 102 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 AL139124.1-201ENST00000609123 421 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 AP004607.9-201ENST00000618202 316 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 AC015726.3-201ENST00000624501 418 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VMP1Q96GC9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 Z73965.1-201ENST00000623412 2297 ntBASIC5.23□□□□□ -1.57
VMP1Q96GC9 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VMP1Q96GC9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VMP1Q96GC9 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
VMP1Q96GC9 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VMP1Q96GC9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VMP1Q96GC9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VMP1Q96GC9 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VMP1Q96GC9 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 RN7SKP124-201ENST00000364730 341 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VMP1Q96GC9 RNU6-452P-201ENST00000384406 107 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 ATP5F1P2-201ENST00000398143 760 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VMP1Q96GC9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 RPS24P8-201ENST00000431490 402 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 PPIAP13-201ENST00000434706 478 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 AL031663.1-201ENST00000437445 219 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 AL450023.1-201ENST00000450868 751 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 OR52E3P-201ENST00000452083 936 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VMP1Q96GC9 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 PMS2P3-207ENST00000529061 717 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 DYNLL1P4-201ENST00000549314 266 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 DHFRP1-201ENST00000579682 559 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 RN7SL753P-201ENST00000581238 290 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 MIR4472-2-201ENST00000582069 67 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 KATNBL1P1-201ENST00000605192 748 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 CR589904.2-201ENST00000612533 440 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 AC020658.4-201ENST00000613987 684 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VMP1Q96GC9 MIR6729-201ENST00000618194 65 ntBASIC5.22□□□□□ -1.57
VMP1Q96GC9 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VMP1Q96GC9 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VMP1Q96GC9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.22□□□□□ -1.57
VMP1Q96GC9 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.21□□□□□ -1.57
VMP1Q96GC9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
VMP1Q96GC9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
VMP1Q96GC9 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VMP1Q96GC9 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.21□□□□□ -1.57
VMP1Q96GC9 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VMP1Q96GC9 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VMP1Q96GC9 OR9K1P-201ENST00000326513 941 ntBASIC5.21□□□□□ -1.58
VMP1Q96GC9 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms