Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MTND2P5-201ENST00000432656 1006 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 CACYBPP1-201ENST00000438592 684 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.11□□□□□ -1.43
HPS3Q969F9 HSFY3P-201ENST00000444242 1191 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 HMGN1P36-201ENST00000446623 298 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS3Q969F9 RPL31P15-201ENST00000449770 338 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS3Q969F9 MTND2P8-201ENST00000450555 1025 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.11□□□□□ -1.43
HPS3Q969F9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HPS3Q969F9 RN7SL174P-201ENST00000475578 289 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 RN7SL101P-201ENST00000496350 279 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 AC021106.1-201ENST00000509020 1058 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.11□□□□□ -1.43
HPS3Q969F9 SNORA70.11-201ENST00000515987 138 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 SNORA70.13-201ENST00000516116 138 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.11□□□□□ -1.43
HPS3Q969F9 AC112191.2-201ENST00000522428 333 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 HMGB1P1-201ENST00000522557 636 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 LRRC6P1-201ENST00000532188 885 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 OR8G3P-201ENST00000533406 921 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
HPS3Q969F9 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS3Q969F9 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS3Q969F9 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS3Q969F9 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS3Q969F9 OR2BH1P-201ENST00000608850 864 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 AC006946.3-201ENST00000609791 756 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 RN7SL787P-201ENST00000613000 284 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
HPS3Q969F9 AC073569.3-201ENST00000619055 682 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS3Q969F9 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.11□□□□□ -1.43
HPS3Q969F9 AC145207.9-201ENST00000623802 325 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HPS3Q969F9 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.11□□□□□ -1.43
HPS3Q969F9 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.11□□□□□ -1.43
HPS3Q969F9 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HPS3Q969F9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.11□□□□□ -1.43
HPS3Q969F9 AL034546.1-201ENST00000623740 3693 ntBASIC6.11□□□□□ -1.43
HPS3Q969F9 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.11□□□□□ -1.43
HPS3Q969F9 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HPS3Q969F9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS3Q969F9 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.1□□□□□ -1.43
HPS3Q969F9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 TMSB4XP4-201ENST00000323496 618 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 RNA5SP46-201ENST00000362370 120 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 RNA5SP27-201ENST00000363839 119 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HPS3Q969F9 SNORA70.6-201ENST00000383934 134 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 DNAJC19P6-201ENST00000401853 280 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 RNA5SP178-201ENST00000410380 128 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 AL445213.1-201ENST00000412589 747 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.1□□□□□ -1.43
HPS3Q969F9 NANOGP5-201ENST00000424456 877 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.1□□□□□ -1.43
HPS3Q969F9 FTLP19-201ENST00000433300 394 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.1□□□□□ -1.43
HPS3Q969F9 AC002504.1-201ENST00000438281 691 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 AL390119.1-201ENST00000440329 312 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 MTND1P33-201ENST00000446251 917 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.1□□□□□ -1.43
HPS3Q969F9 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.1□□□□□ -1.43
HPS3Q969F9 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS3Q969F9 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HPS3Q969F9 PPIAP19-201ENST00000486414 492 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.1□□□□□ -1.43
HPS3Q969F9 AC079064.1-201ENST00000528365 362 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.1□□□□□ -1.43
HPS3Q969F9 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.1□□□□□ -1.43
HPS3Q969F9 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.1□□□□□ -1.43
HPS3Q969F9 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.1□□□□□ -1.43
HPS3Q969F9 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.1□□□□□ -1.43
HPS3Q969F9 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.1□□□□□ -1.43
HPS3Q969F9 BNIP3P32-201ENST00000600015 554 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.1□□□□□ -1.43
HPS3Q969F9 AL160237.3-201ENST00000604114 1013 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.1□□□□□ -1.43
HPS3Q969F9 MIR6768-201ENST00000610734 72 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 AC109309.2-201ENST00000612597 332 ntBASIC6.1□□□□□ -1.43
HPS3Q969F9 AL118522.2-201ENST00000616045 615 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms