Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 RNA5SP345-201ENST00000410646 108 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AL162591.2-201ENST00000449634 317 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AC090017.1-201ENST00000548612 1779 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 UGT2B26P-201ENST00000508672 1613 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 LRRC37BP1-201ENST00000398851 714 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 RN7SL303P-201ENST00000469773 251 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AP005901.4-201ENST00000577336 569 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 MIR4433B-201ENST00000581329 102 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AC008833.1-201ENST00000611633 691 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 AC023043.4-201ENST00000612081 449 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 TCP11X1-202ENST00000622971 1372 ntBASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ALMS1Q8TCU4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AC002525.1-201ENST00000624392 1622 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 U3.28-201ENST00000391249 210 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 NUTF2P3-201ENST00000448540 384 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AC245028.2-201ENST00000458673 253 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AL583832.1-201ENST00000603227 784 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AL161756.2-201ENST00000604597 246 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 SNORA63.1-201ENST00000362493 131 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 NDUFB4P11-201ENST00000560510 395 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 RN7SL652P-201ENST00000577769 300 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AL157762.1-201ENST00000619612 415 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 MIR6075-201ENST00000620782 95 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AC008758.3-201ENST00000507003 1829 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 RN7SKP153-201ENST00000365026 316 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 TMSB10P2-201ENST00000416049 131 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AL356387.2-201ENST00000422272 243 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AC010476.1-201ENST00000519111 851 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 MIR4298-201ENST00000584380 73 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AC039056.2-201ENST00000622261 511 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AP003400.2-201ENST00000624036 666 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AC069542.2-201ENST00000624816 216 ntBASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC3.23□□□□□ -1.89
ALMS1Q8TCU4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms