Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 Z74021.1-201ENST00000423610 407 ntBASIC7.32□□□□□ -1.24
VPS8Q8N3P4 HMGN2P27-201ENST00000427352 270 ntBASIC7.32□□□□□ -1.24
VPS8Q8N3P4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC7.32□□□□□ -1.24
VPS8Q8N3P4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC7.32□□□□□ -1.24
VPS8Q8N3P4 NDUFA12P1-201ENST00000455914 406 ntBASIC7.32□□□□□ -1.24
VPS8Q8N3P4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC7.32□□□□□ -1.24
VPS8Q8N3P4 AC087477.6-201ENST00000559595 843 ntBASIC7.32□□□□□ -1.24
VPS8Q8N3P4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
VPS8Q8N3P4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
VPS8Q8N3P4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
VPS8Q8N3P4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
VPS8Q8N3P4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 AC136624.1-201ENST00000400791 413 ntBASIC7.31□□□□□ -1.24
VPS8Q8N3P4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 CEACAMP9-201ENST00000442990 513 ntBASIC7.31□□□□□ -1.24
VPS8Q8N3P4 AC025674.1-201ENST00000507074 324 ntBASIC7.31□□□□□ -1.24
VPS8Q8N3P4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 RPL12P25-202ENST00000598100 674 ntBASIC7.31□□□□□ -1.24
VPS8Q8N3P4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VPS8Q8N3P4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 SNORA71.2-201ENST00000364941 134 ntBASIC7.3□□□□□ -1.24
VPS8Q8N3P4 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 BX119904.3-201ENST00000428194 957 ntBASIC7.3□□□□□ -1.24
VPS8Q8N3P4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 RN7SL205P-201ENST00000490174 284 ntBASIC7.3□□□□□ -1.24
VPS8Q8N3P4 AC108043.1-201ENST00000512696 574 ntBASIC7.3□□□□□ -1.24
VPS8Q8N3P4 C1GALT1P3-201ENST00000522049 819 ntBASIC7.3□□□□□ -1.24
VPS8Q8N3P4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 RN7SL52P-201ENST00000584271 284 ntBASIC7.3□□□□□ -1.24
VPS8Q8N3P4 AC100847.1-201ENST00000611316 481 ntBASIC7.3□□□□□ -1.24
VPS8Q8N3P4 MIR378J-201ENST00000611988 109 ntBASIC7.3□□□□□ -1.24
VPS8Q8N3P4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 RN7SL722P-201ENST00000617780 284 ntBASIC7.3□□□□□ -1.24
VPS8Q8N3P4 RN7SL565P-201ENST00000618246 284 ntBASIC7.3□□□□□ -1.24
VPS8Q8N3P4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 AC133552.1-201ENST00000569988 4007 ntBASIC7.3□□□□□ -1.24
VPS8Q8N3P4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VPS8Q8N3P4 AC004656.1-201ENST00000568479 4951 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 AL137100.1-201ENST00000556703 1620 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 VN2R3P-201ENST00000422626 1412 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 AC126755.2-208ENST00000327792 462 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 AC138969.1-213ENST00000331436 462 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 RNU1-32P-201ENST00000363937 159 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 UQCRBP1-201ENST00000421129 336 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 MORF4L1P4-201ENST00000450245 976 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 AC009220.1-201ENST00000451614 275 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 AC104763.1-201ENST00000475274 360 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 MIR7641-1-201ENST00000627518 61 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 ZNF402P-201ENST00000404435 3100 ntBASIC7.29□□□□□ -1.24
VPS8Q8N3P4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS8Q8N3P4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AL731532.2-201ENST00000623542 1953 ntBASIC7.28□□□□□ -1.24
VPS8Q8N3P4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.28□□□□□ -1.24
VPS8Q8N3P4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms