Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 IRF5P1-201ENST00000504852 2164 ntBASIC4.6□□□□□ -1.67
C9orf40Q8IXQ3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 RNU6-386P-201ENST00000362650 107 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 SNORA73.1-201ENST00000363107 205 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 OR6C64P-201ENST00000419708 825 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AL590762.4-201ENST00000425885 253 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 RPL34P6-201ENST00000432390 345 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 PRPF38AP2-201ENST00000438179 851 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 SCAND3P1-201ENST00000439854 1060 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 ZNF652P1-201ENST00000442420 1309 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AC020633.1-201ENST00000468439 2247 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AP001922.4-201ENST00000526967 290 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AC125612.1-201ENST00000547580 377 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 TVP23CP2-201ENST00000571473 623 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 MIR4436B2-201ENST00000581415 91 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 MIR4436B1-201ENST00000583272 91 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AC011487.3-201ENST00000593607 453 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AP002884.5-201ENST00000595053 1132 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AL133406.3-201ENST00000606817 541 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AL049794.2-201ENST00000616301 365 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AC011447.7-201ENST00000624228 1590 ntBASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.59□□□□□ -1.67
C9orf40Q8IXQ3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
C9orf40Q8IXQ3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.59□□□□□ -1.68
C9orf40Q8IXQ3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
C9orf40Q8IXQ3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
C9orf40Q8IXQ3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AL731566.1-201ENST00000620490 1937 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC068446.1-201ENST00000556425 1549 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC013442.1-201ENST00000397347 228 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 DHFRP5-201ENST00000406944 564 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 RAB9AP4-201ENST00000415230 609 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC073052.1-201ENST00000440417 714 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC112498.1-201ENST00000444401 332 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 CYCSP24-201ENST00000445119 316 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 C1DP3-201ENST00000455013 423 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 RNA5SP392-201ENST00000516905 112 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC021006.3-201ENST00000530771 192 ntBASIC4.58□□□□□ -1.68
C9orf40Q8IXQ3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms