Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 E2F6P2-201ENST00000420708 748 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC28Q86X40 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 OTX2P1-201ENST00000450956 354 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 RNU6-964P-201ENST00000516524 69 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 RNA5SP360-201ENST00000516555 118 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 OR4A46P-201ENST00000527255 933 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 AC134349.2-201ENST00000535136 910 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC28Q86X40 HMGN2P6-201ENST00000551091 273 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 AC051619.2-201ENST00000559063 397 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 AC011447.4-201ENST00000587562 111 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 AC009163.6-201ENST00000612367 342 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 AC099494.2-201ENST00000623371 978 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC28Q86X40 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC28Q86X40 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC28Q86X40 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC28Q86X40 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LRRC28Q86X40 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC28Q86X40 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC28Q86X40 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC28Q86X40 AL672167.1-205ENST00000641112 3080 ntBASIC4.4□□□□□ -1.71
LRRC28Q86X40 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 AC005332.5-201ENST00000591222 2919 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 U3.3-201ENST00000362986 216 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 RNA5SP507-201ENST00000363603 121 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 U8.4-201ENST00000363626 134 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 RNA5SP90-201ENST00000364801 99 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 SNORA70-201ENST00000384436 135 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 RN7SKP213-201ENST00000410746 298 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 FABP7P1-201ENST00000424004 391 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 RPS4XP16-201ENST00000427198 791 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 RPS27P18-201ENST00000431701 247 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 LYPLA1P1-201ENST00000434514 622 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 RPS29P10-201ENST00000439197 166 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 Z80107.2-201ENST00000445127 392 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 AC009127.1-201ENST00000467090 155 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 AC008410.1-201ENST00000483777 339 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 DEFB109F-201ENST00000491870 277 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 AC147055.3-201ENST00000510547 851 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 AC044860.2-201ENST00000561005 179 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 AC087283.1-201ENST00000604029 1074 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 AP005131.7-201ENST00000610087 611 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 RPSAP73-201ENST00000614820 330 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 uc_338.18-201ENST00000615451 175 ntBASIC4.39□□□□□ -1.71
LRRC28Q86X40 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRC28Q86X40 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC28Q86X40 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC28Q86X40 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC28Q86X40 PANDAR-201ENST00000629595 1506 ntBASIC4.38□□□□□ -1.71
LRRC28Q86X40 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.38□□□□□ -1.71
LRRC28Q86X40 AC008549.2-201ENST00000333482 706 ntBASIC4.38□□□□□ -1.71
LRRC28Q86X40 SNORA2.3-201ENST00000383920 135 ntBASIC4.38□□□□□ -1.71
LRRC28Q86X40 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRC28Q86X40 MIR1182-201ENST00000408363 97 ntBASIC4.38□□□□□ -1.71
LRRC28Q86X40 RN7SKP126-201ENST00000411143 300 ntBASIC4.38□□□□□ -1.71
LRRC28Q86X40 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms