Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VSTM1Q6UX27 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
VSTM1Q6UX27 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.68□□□□□ -1.5
VSTM1Q6UX27 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.68□□□□□ -1.5
VSTM1Q6UX27 C4BPAP1-201ENST00000415474 1893 ntBASIC5.68□□□□□ -1.5
VSTM1Q6UX27 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VSTM1Q6UX27 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSTM1Q6UX27 SEPT7P7-201ENST00000420492 1301 ntBASIC5.68□□□□□ -1.5
VSTM1Q6UX27 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.68□□□□□ -1.5
VSTM1Q6UX27 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VSTM1Q6UX27 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VSTM1Q6UX27 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VSTM1Q6UX27 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 ZNF733P-202ENST00000444809 1573 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AL078621.3-201ENST00000623707 2042 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AC003985.2-201ENST00000562268 1669 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 U3.2-201ENST00000362981 210 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 VPS26BP1-201ENST00000417155 755 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 BRWD1P3-201ENST00000428816 390 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 MTCYBP11-201ENST00000447254 1109 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 MTND1P31-201ENST00000449206 961 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 FAR2P1-206ENST00000449736 709 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 RPL7P40-201ENST00000481703 745 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AC021146.5-201ENST00000503544 545 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 GOLGA5P1-201ENST00000507317 980 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 RNU6-1334P-201ENST00000516032 105 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 YWHABP2-201ENST00000540201 713 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 NMNAT1P5-201ENST00000559657 841 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AGGF1P9-201ENST00000561884 913 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AC023825.1-201ENST00000566704 1030 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AC098935.2-201ENST00000604222 466 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 QTRT1P1-201ENST00000604344 1078 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AC090527.3-201ENST00000619041 548 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AC018445.2-201ENST00000622987 260 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 CU459211.1-201ENST00000635667 749 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 OR5AC4P-202ENST00000642086 985 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VSTM1Q6UX27 AL360270.2-201ENST00000562952 5985 ntBASIC5.67□□□□□ -1.5
VSTM1Q6UX27 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 AC011755.1-201ENST00000623763 2049 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 RPL22P22-201ENST00000395439 379 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 SPTLC1P2-201ENST00000407089 121 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 AL606495.1-201ENST00000422100 813 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 FO393414.1-201ENST00000428697 1184 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 AL606490.7-201ENST00000433136 191 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 AC007563.3-201ENST00000433233 371 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 EEF1B2P5-201ENST00000444820 548 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 AC005532.2-201ENST00000467154 373 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 RN7SL222P-201ENST00000476452 299 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 SUMO2P5-201ENST00000506790 245 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 RN7SKP265-201ENST00000516448 223 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 MTND2P38-201ENST00000522536 667 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 AC022832.1-201ENST00000530718 645 ntBASIC5.66□□□□□ -1.5
VSTM1Q6UX27 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.66□□□□□ -1.5
VSTM1Q6UX27 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms