Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 ZNF965P-201ENST00000432501 817 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 CYCSP6-201ENST00000434498 302 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 TXNP2-201ENST00000443918 295 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AL096829.2-201ENST00000446582 742 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 SETP20-201ENST00000457046 852 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 NPM1P17-201ENST00000479221 602 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 RPL7P6-201ENST00000480903 738 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AC069306.1-201ENST00000507006 843 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AC103833.1-201ENST00000517442 172 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AC022884.2-201ENST00000578535 580 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AC009597.2-201ENST00000604659 592 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AC005840.5-201ENST00000619166 599 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AP002967.1-201ENST00000624203 539 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 AC006210.2-201ENST00000367074 1545 ntBASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ZNF549Q6P9A3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 SMG1P7-201ENST00000565246 2704 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 HSPD1P14-201ENST00000432666 1618 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC008079.2-201ENST00000623543 20396 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 ZNF29P-201ENST00000225587 168 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 SNORD115-48-201ENST00000364764 76 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 RN7SKP269-201ENST00000365545 319 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 MIR105-1-201ENST00000385222 81 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 TAS2R15P-201ENST00000390674 928 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 RPL22P22-201ENST00000395439 379 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 MTCO2P21-201ENST00000419780 677 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AL133325.1-201ENST00000421090 382 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AL513321.1-201ENST00000441175 761 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC096992.1-201ENST00000459808 709 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC006427.1-201ENST00000514359 712 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 RNA5SP362-201ENST00000516048 118 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 UBTFL10-201ENST00000528532 562 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 RN7SL708P-201ENST00000580952 299 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 RPP40P2-201ENST00000603596 712 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC004241.3-201ENST00000611728 517 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AC068620.4-201ENST00000636730 1182 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AL590396.4-201ENST00000636779 956 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 AP005435.3-201ENST00000531260 3198 ntBASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ZNF549Q6P9A3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ZNF549Q6P9A3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.19□□□□□ -1.58
ZNF549Q6P9A3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ZNF549Q6P9A3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
ZNF549Q6P9A3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.19□□□□□ -1.58
ZNF549Q6P9A3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.19□□□□□ -1.58
ZNF549Q6P9A3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ZNF549Q6P9A3 RNA5SP132-201ENST00000364725 118 ntBASIC5.19□□□□□ -1.58
ZNF549Q6P9A3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.19□□□□□ -1.58
ZNF549Q6P9A3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms