Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 HDAC1P2-201ENST00000453661 1398 ntBASIC6.18□□□□□ -1.42
FNDC3BQ53EP0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
FNDC3BQ53EP0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC140479.2-201ENST00000421567 3130 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC005034.3-201ENST00000604845 1747 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AL355852.1-201ENST00000454081 1771 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 TMSB4XP8-201ENST00000402089 135 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 HNRNPDP2-201ENST00000406475 478 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 TMSB4XP6-201ENST00000415187 135 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 ZNF885P-201ENST00000420174 1098 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 TMSB4XP1-201ENST00000424567 135 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC245884.2-201ENST00000426257 404 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 SEPT7P5-201ENST00000434048 306 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 NDUFS5P5-201ENST00000437256 321 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 THAP5P1-201ENST00000439089 262 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC092809.1-201ENST00000441469 474 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 MTND2P4-201ENST00000445034 1004 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 MTCO2P25-201ENST00000447065 681 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AL445466.1-201ENST00000448432 357 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC104306.1-201ENST00000449702 371 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 PPIAP20-201ENST00000449839 135 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 RPL31P3-201ENST00000458430 332 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC018638.3-201ENST00000461273 132 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 RPL7P18-201ENST00000478965 734 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC083795.1-201ENST00000491760 320 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC073358.1-201ENST00000505671 684 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 MTND1P22-201ENST00000510572 951 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC117532.1-201ENST00000514638 323 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 RNA5SP116-201ENST00000516132 98 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC073581.1-201ENST00000519036 575 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC006530.1-201ENST00000555980 571 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 OR2AS2P-201ENST00000606902 342 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC122133.1-201ENST00000613964 233 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 TCL6_3.1-201ENST00000619064 137 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 DCAF13P3-201ENST00000561147 1334 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 GNL2P1-201ENST00000451274 2190 ntBASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.17□□□□□ -1.42
FNDC3BQ53EP0 AC021755.1-201ENST00000559747 1447 ntBASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 RNU105B-201ENST00000364478 208 ntBASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 AL031985.1-201ENST00000392713 418 ntBASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 AL451046.1-201ENST00000406097 534 ntBASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 SETP15-201ENST00000412724 337 ntBASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.16□□□□□ -1.42
FNDC3BQ53EP0 AL596448.1-201ENST00000415024 392 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms