Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MTATP6P14-201ENST00000455189 673 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 HMGB1P4-201ENST00000455362 567 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 TPT1P1-201ENST00000458495 518 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC110749.1-201ENST00000462007 357 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC111193.1-201ENST00000504097 155 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 snoU109.6-201ENST00000516831 118 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC021678.3-201ENST00000517893 476 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 TRIM77BP-201ENST00000524985 1119 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 PMS2P3-207ENST00000529061 717 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC004808.1-201ENST00000627671 721 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 AL355480.1-201ENST00000629041 99 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 AL356118.1-201ENST00000635272 1078 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 OR8G3P-202ENST00000641572 1255 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC38Q502W7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 PWAR1-201ENST00000624188 2414 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.73□□□□□ -1.49
CCDC38Q502W7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC38Q502W7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC38Q502W7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC38Q502W7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC38Q502W7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC079097.1-201ENST00000512187 1399 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC38Q502W7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC38Q502W7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AL035660.1-201ENST00000422041 222 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 FTH1P16-201ENST00000435241 552 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 DNAJA1P5-201ENST00000440278 943 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AL096803.2-201ENST00000450032 677 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 RN7SL188P-201ENST00000469842 285 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 UBFD1P1-201ENST00000473259 814 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 RN7SL591P-201ENST00000496150 292 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 SCARNA1-201ENST00000517138 166 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC060775.1-201ENST00000518241 520 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC138701.1-201ENST00000524329 714 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 HSPE1P2-201ENST00000554777 306 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC067773.1-201ENST00000603284 1094 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC023813.4-201ENST00000607580 580 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC124016.2-201ENST00000610058 665 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC104763.3-201ENST00000613765 618 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC38Q502W7 uc_338.9-201ENST00000617424 182 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC129778.1-202ENST00000623812 261 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 FRG1EP-201ENST00000634469 770 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 AL591379.1-207ENST00000635982 261 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 AC006927.2-201ENST00000639256 389 ntBASIC5.72□□□□□ -1.49
CCDC38Q502W7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC38Q502W7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC38Q502W7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC38Q502W7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC38Q502W7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.71□□□□□ -1.49
CCDC38Q502W7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC38Q502W7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CCDC38Q502W7 MRE11P1-201ENST00000464884 2127 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms