Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC018552.1-201ENST00000562099 811 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 MIR6810-201ENST00000622701 70 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
GABPAQ06546 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.7□□□□□ -1.5
GABPAQ06546 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.7□□□□□ -1.5
GABPAQ06546 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.7□□□□□ -1.5
GABPAQ06546 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GABPAQ06546 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.7□□□□□ -1.5
GABPAQ06546 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.69□□□□□ -1.5
GABPAQ06546 AL132640.2-201ENST00000559968 1698 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 Z98755.1-201ENST00000407015 1384 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
GABPAQ06546 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GABPAQ06546 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
GABPAQ06546 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GABPAQ06546 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.69□□□□□ -1.5
GABPAQ06546 AL590240.1-201ENST00000334118 313 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 MIR141-201ENST00000384975 95 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 MIR298-201ENST00000401212 88 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 RPL21P67-201ENST00000402896 478 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 AL049697.2-201ENST00000403708 294 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 OR51B3P-201ENST00000412287 913 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 PCNPP4-201ENST00000414817 517 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 AC009506.2-201ENST00000420635 840 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 FABP7P1-201ENST00000424004 391 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
GABPAQ06546 RNU7-157P-201ENST00000459600 66 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.69□□□□□ -1.5
GABPAQ06546 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.69□□□□□ -1.5
GABPAQ06546 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.69□□□□□ -1.5
GABPAQ06546 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
GABPAQ06546 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.69□□□□□ -1.5
GABPAQ06546 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.69□□□□□ -1.5
GABPAQ06546 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.69□□□□□ -1.5
GABPAQ06546 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.69□□□□□ -1.5
GABPAQ06546 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.69□□□□□ -1.5
GABPAQ06546 MIR6798-201ENST00000612887 67 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.69□□□□□ -1.5
GABPAQ06546 MIR7641-1-201ENST00000627518 61 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.69□□□□□ -1.5
GABPAQ06546 TLK1P1-201ENST00000456760 2440 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 AC109446.4-201ENST00000623235 2755 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
GABPAQ06546 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.69□□□□□ -1.5
GABPAQ06546 AC018628.1-201ENST00000624147 3819 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.69□□□□□ -1.5
GABPAQ06546 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.68□□□□□ -1.5
GABPAQ06546 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.68□□□□□ -1.5
GABPAQ06546 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GABPAQ06546 AC009643.2-201ENST00000603543 1448 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GABPAQ06546 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
GABPAQ06546 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GABPAQ06546 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GABPAQ06546 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GABPAQ06546 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
GABPAQ06546 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
GABPAQ06546 GLULP6-201ENST00000399502 913 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 TPT1P13-201ENST00000449760 499 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 CEACAMP6-201ENST00000452007 574 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 AP002371.1-201ENST00000463604 433 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 AC021660.1-201ENST00000465006 554 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 AL049874.2-201ENST00000492636 288 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 AC091868.1-201ENST00000508746 304 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 Y_RNA.719-201ENST00000517156 106 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.68□□□□□ -1.5
GABPAQ06546 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.68□□□□□ -1.5
GABPAQ06546 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.68□□□□□ -1.5
GABPAQ06546 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GABPAQ06546 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GABPAQ06546 AC133555.2-201ENST00000550213 292 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.68□□□□□ -1.5
GABPAQ06546 AGGF1P9-201ENST00000561884 913 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.68□□□□□ -1.5
GABPAQ06546 ELOCP28-201ENST00000590044 317 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 AC107993.1-201ENST00000591343 684 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 AC073091.2-201ENST00000603205 907 ntBASIC5.68□□□□□ -1.5
GABPAQ06546 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
GABPAQ06546 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GABPAQ06546 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GABPAQ06546 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.68□□□□□ -1.5
GABPAQ06546 CASC19-255ENST00000641733 1385 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 AL132656.3-201ENST00000606384 1595 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GABPAQ06546 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GABPAQ06546 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
GABPAQ06546 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GABPAQ06546 AC007382.1-201ENST00000624376 2618 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
GABPAQ06546 DHX40P1-201ENST00000588725 1412 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
GABPAQ06546 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
GABPAQ06546 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
GABPAQ06546 MIR133A2-201ENST00000347538 102 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 RNA5SP332-201ENST00000391063 115 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.67□□□□□ -1.5
GABPAQ06546 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.67□□□□□ -1.5
GABPAQ06546 GLUD1P9-201ENST00000420997 1173 ntBASIC5.67□□□□□ -1.5
GABPAQ06546 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.67□□□□□ -1.5
GABPAQ06546 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms