Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 RPS27AP15-201ENST00000447672 466 ntBASIC3.28□□□□□ -1.88
RPL39P62891 RPS27AP2-201ENST00000457576 465 ntBASIC3.28□□□□□ -1.88
RPL39P62891 RPL23AP56-201ENST00000460778 453 ntBASIC3.28□□□□□ -1.88
RPL39P62891 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.28□□□□□ -1.88
RPL39P62891 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.28□□□□□ -1.88
RPL39P62891 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.28□□□□□ -1.88
RPL39P62891 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.28□□□□□ -1.88
RPL39P62891 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.28□□□□□ -1.88
RPL39P62891 MTND6P33-201ENST00000571794 183 ntBASIC3.28□□□□□ -1.88
RPL39P62891 AL121834.1-201ENST00000572284 509 ntBASIC3.28□□□□□ -1.88
RPL39P62891 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 AC091178.1-203ENST00000584586 279 ntBASIC3.28□□□□□ -1.88
RPL39P62891 AC008521.2-201ENST00000591021 259 ntBASIC3.28□□□□□ -1.88
RPL39P62891 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 RPL7P50-201ENST00000600588 727 ntBASIC3.28□□□□□ -1.88
RPL39P62891 RPL26P30-202ENST00000602923 645 ntBASIC3.28□□□□□ -1.88
RPL39P62891 AL589674.2-201ENST00000604304 337 ntBASIC3.28□□□□□ -1.88
RPL39P62891 AL353726.1-201ENST00000614041 1000 ntBASIC3.28□□□□□ -1.88
RPL39P62891 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.28□□□□□ -1.88
RPL39P62891 MIR7154-201ENST00000620673 73 ntBASIC3.28□□□□□ -1.88
RPL39P62891 MIR6837-201ENST00000620884 64 ntBASIC3.28□□□□□ -1.88
RPL39P62891 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RPL39P62891 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RPL39P62891 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RPL39P62891 HSPA8P18-201ENST00000439846 1928 ntBASIC3.28□□□□□ -1.88
RPL39P62891 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RPL39P62891 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.28□□□□□ -1.89
RPL39P62891 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
RPL39P62891 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.27□□□□□ -1.89
RPL39P62891 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.27□□□□□ -1.89
RPL39P62891 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 AC099654.2-201ENST00000433031 1980 ntBASIC3.27□□□□□ -1.89
RPL39P62891 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 SNURFL-201ENST00000309296 343 ntBASIC3.27□□□□□ -1.89
RPL39P62891 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
RPL39P62891 AL590762.2-201ENST00000395798 571 ntBASIC3.27□□□□□ -1.89
RPL39P62891 Z97832.1-201ENST00000402490 328 ntBASIC3.27□□□□□ -1.89
RPL39P62891 RNA5SP296-201ENST00000410523 111 ntBASIC3.27□□□□□ -1.89
RPL39P62891 RN7SKP216-201ENST00000411050 312 ntBASIC3.27□□□□□ -1.89
RPL39P62891 GTF2IP5-201ENST00000414608 731 ntBASIC3.27□□□□□ -1.89
RPL39P62891 AC004690.1-201ENST00000418216 328 ntBASIC3.27□□□□□ -1.89
RPL39P62891 OR2X1P-201ENST00000421144 687 ntBASIC3.27□□□□□ -1.89
RPL39P62891 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.27□□□□□ -1.89
RPL39P62891 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.27□□□□□ -1.89
RPL39P62891 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.27□□□□□ -1.89
RPL39P62891 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.27□□□□□ -1.89
RPL39P62891 RPS26P28-201ENST00000470806 348 ntBASIC3.27□□□□□ -1.89
RPL39P62891 RN7SL222P-201ENST00000476452 299 ntBASIC3.27□□□□□ -1.89
RPL39P62891 RPL7P39-201ENST00000481157 744 ntBASIC3.27□□□□□ -1.89
RPL39P62891 MRPS33P2-201ENST00000507850 322 ntBASIC3.27□□□□□ -1.89
RPL39P62891 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC3.27□□□□□ -1.89
RPL39P62891 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC3.27□□□□□ -1.89
RPL39P62891 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.27□□□□□ -1.89
RPL39P62891 HMGB2P1-201ENST00000591146 634 ntBASIC3.27□□□□□ -1.89
RPL39P62891 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.27□□□□□ -1.89
RPL39P62891 FKBP1AP1-201ENST00000594588 318 ntBASIC3.27□□□□□ -1.89
RPL39P62891 AC073137.1-201ENST00000605636 634 ntBASIC3.27□□□□□ -1.89
RPL39P62891 AC079395.2-201ENST00000610982 737 ntBASIC3.27□□□□□ -1.89
RPL39P62891 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.27□□□□□ -1.89
RPL39P62891 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.27□□□□□ -1.89
RPL39P62891 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
RPL39P62891 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.27□□□□□ -1.89
RPL39P62891 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RPL39P62891 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.27□□□□□ -1.89
RPL39P62891 AL031119.1-201ENST00000404707 1879 ntBASIC3.26□□□□□ -1.89
RPL39P62891 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC3.26□□□□□ -1.89
RPL39P62891 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.26□□□□□ -1.89
RPL39P62891 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPL39P62891 MAPK10-286ENST00000641208 8747 ntBASIC3.26□□□□□ -1.89
RPL39P62891 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.26□□□□□ -1.89
RPL39P62891 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPL39P62891 AC067945.1-201ENST00000342609 618 ntBASIC3.26□□□□□ -1.89
RPL39P62891 RN7SKP115-201ENST00000363177 317 ntBASIC3.26□□□□□ -1.89
RPL39P62891 RNA5SP428-201ENST00000365129 132 ntBASIC3.26□□□□□ -1.89
RPL39P62891 RNA5SP151-201ENST00000365632 117 ntBASIC3.26□□□□□ -1.89
RPL39P62891 RN7SKP293-201ENST00000411389 296 ntBASIC3.26□□□□□ -1.89
RPL39P62891 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.26□□□□□ -1.89
RPL39P62891 OR52B5P-201ENST00000435337 951 ntBASIC3.26□□□□□ -1.89
RPL39P62891 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPL39P62891 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.26□□□□□ -1.89
RPL39P62891 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RPL39P62891 PSMC1P13-201ENST00000458195 985 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms