Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LMO4P61968 SNORD65-201ENST00000391079 73 ntBASIC4.28□□□□□ -1.72
LMO4P61968 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.28□□□□□ -1.72
LMO4P61968 PTGES3P2-201ENST00000407942 482 ntBASIC4.28□□□□□ -1.72
LMO4P61968 SNORA79B-201ENST00000410557 148 ntBASIC4.28□□□□□ -1.72
LMO4P61968 RPL37P18-201ENST00000411602 243 ntBASIC4.28□□□□□ -1.72
LMO4P61968 RPS3AP25-201ENST00000411660 793 ntBASIC4.28□□□□□ -1.72
LMO4P61968 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.28□□□□□ -1.72
LMO4P61968 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.28□□□□□ -1.72
LMO4P61968 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.28□□□□□ -1.72
LMO4P61968 MTND4LP13-201ENST00000425022 298 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC104837.2-201ENST00000427236 424 ntBASIC4.28□□□□□ -1.72
LMO4P61968 USP12PY-201ENST00000427677 1064 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC114973.1-201ENST00000429057 632 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC023141.6-201ENST00000429418 337 ntBASIC4.28□□□□□ -1.72
LMO4P61968 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.28□□□□□ -1.72
LMO4P61968 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.28□□□□□ -1.72
LMO4P61968 AC073648.4-201ENST00000442655 781 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.28□□□□□ -1.72
LMO4P61968 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 RN7SL189P-201ENST00000468631 289 ntBASIC4.28□□□□□ -1.72
LMO4P61968 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LMO4P61968 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LMO4P61968 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.28□□□□□ -1.72
LMO4P61968 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
LMO4P61968 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 AP003080.1-202ENST00000526526 915 ntBASIC4.28□□□□□ -1.72
LMO4P61968 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LMO4P61968 AC008033.2-201ENST00000542626 177 ntBASIC4.28□□□□□ -1.72
LMO4P61968 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LMO4P61968 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.28□□□□□ -1.72
LMO4P61968 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.28□□□□□ -1.72
LMO4P61968 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.28□□□□□ -1.72
LMO4P61968 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.28□□□□□ -1.72
LMO4P61968 MTATP6P24-201ENST00000576835 677 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.28□□□□□ -1.72
LMO4P61968 RN7SL339P-201ENST00000580597 296 ntBASIC4.28□□□□□ -1.72
LMO4P61968 FAM106CP-201ENST00000582212 507 ntBASIC4.28□□□□□ -1.72
LMO4P61968 MIR4420-201ENST00000583944 77 ntBASIC4.28□□□□□ -1.72
LMO4P61968 MIR7853-201ENST00000584820 132 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC015911.5-201ENST00000587076 451 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC011487.3-201ENST00000593607 453 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC125494.2-201ENST00000602431 657 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC011626.1-201ENST00000604710 562 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC112220.2-201ENST00000605513 533 ntBASIC4.28□□□□□ -1.72
LMO4P61968 FAM25E-202ENST00000608562 189 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 AC084036.1-201ENST00000609190 508 ntBASIC4.28□□□□□ -1.72
LMO4P61968 CR589904.2-201ENST00000612533 440 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC140725.3-201ENST00000616193 880 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AL133370.2-201ENST00000619934 439 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC112694.2-201ENST00000623697 768 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC138907.10-201ENST00000623708 983 ntBASIC4.28□□□□□ -1.72
LMO4P61968 AC073342.3-201ENST00000624211 193 ntBASIC4.28□□□□□ -1.72
LMO4P61968 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LMO4P61968 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LMO4P61968 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LMO4P61968 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.28□□□□□ -1.72
LMO4P61968 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
LMO4P61968 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LMO4P61968 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO4P61968 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LMO4P61968 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO4P61968 AC004158.1-201ENST00000564508 4319 ntBASIC4.27□□□□□ -1.73
LMO4P61968 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.27□□□□□ -1.73
LMO4P61968 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LMO4P61968 OR9G4-201ENST00000302957 984 ntBASIC4.27□□□□□ -1.73
LMO4P61968 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO4P61968 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LMO4P61968 MIR122-201ENST00000385044 85 ntBASIC4.27□□□□□ -1.73
LMO4P61968 MIR589-201ENST00000385238 99 ntBASIC4.27□□□□□ -1.73
LMO4P61968 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LMO4P61968 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LMO4P61968 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LMO4P61968 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO4P61968 RNU6-584P-201ENST00000410350 95 ntBASIC4.27□□□□□ -1.73
LMO4P61968 DPPA2P2-201ENST00000418220 897 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.27□□□□□ -1.73
LMO4P61968 AC138761.5-201ENST00000433967 325 ntBASIC4.27□□□□□ -1.73
LMO4P61968 RHOT1P3-201ENST00000436571 331 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AL117351.1-201ENST00000438864 766 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AL606490.8-201ENST00000441624 319 ntBASIC4.27□□□□□ -1.73
LMO4P61968 RPL34P20-201ENST00000442771 351 ntBASIC4.27□□□□□ -1.73
LMO4P61968 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.27□□□□□ -1.73
LMO4P61968 Z80107.2-201ENST00000445127 392 ntBASIC4.27□□□□□ -1.73
LMO4P61968 MTND5P8-201ENST00000449817 1083 ntBASIC4.27□□□□□ -1.73
LMO4P61968 SEPT7P3-201ENST00000455017 621 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms