Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC233289.1-201ENST00000403700 508 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 AP000580.1-201ENST00000404439 358 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 RPL12P43-201ENST00000420608 499 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.8□□□□□ -1.64
PKNOX1P55347 EIF4HP2-201ENST00000424380 563 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.8□□□□□ -1.64
PKNOX1P55347 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.8□□□□□ -1.64
PKNOX1P55347 NMNAT1P2-201ENST00000435192 860 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.8□□□□□ -1.64
PKNOX1P55347 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.8□□□□□ -1.64
PKNOX1P55347 SCAND3P1-201ENST00000439854 1060 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PKNOX1P55347 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PKNOX1P55347 AL445433.1-201ENST00000457507 257 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 AC098583.1-201ENST00000480875 255 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 RPS4XP1-201ENST00000482189 787 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 NPM1P29-201ENST00000483112 803 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PKNOX1P55347 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.8□□□□□ -1.64
PKNOX1P55347 RNU4-18P-201ENST00000516751 149 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.8□□□□□ -1.64
PKNOX1P55347 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.8□□□□□ -1.64
PKNOX1P55347 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.8□□□□□ -1.64
PKNOX1P55347 AC090888.3-201ENST00000558917 509 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.8□□□□□ -1.64
PKNOX1P55347 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.8□□□□□ -1.64
PKNOX1P55347 IMMP1LP1-201ENST00000605170 488 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 AL512329.2-201ENST00000607350 548 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.8□□□□□ -1.64
PKNOX1P55347 AC126915.2-201ENST00000610957 190 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 AC006840.1-201ENST00000623069 542 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.8□□□□□ -1.64
PKNOX1P55347 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PKNOX1P55347 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PKNOX1P55347 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PKNOX1P55347 NXF4-202ENST00000416098 1465 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PKNOX1P55347 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.8□□□□□ -1.64
PKNOX1P55347 AC009643.2-201ENST00000603543 1448 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.8□□□□□ -1.64
PKNOX1P55347 AL359922.3-201ENST00000624779 1670 ntBASIC4.8□□□□□ -1.64
PKNOX1P55347 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 RN7SKP162-201ENST00000363605 345 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 SNORA79B-201ENST00000410557 148 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 RN7SKP247-201ENST00000411094 308 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.79□□□□□ -1.64
PKNOX1P55347 NPM1P33-201ENST00000438918 872 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.79□□□□□ -1.64
PKNOX1P55347 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.79□□□□□ -1.64
PKNOX1P55347 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.79□□□□□ -1.64
PKNOX1P55347 AC092647.2-201ENST00000452998 253 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AL389915.2-201ENST00000454576 441 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 SEPT14P1-201ENST00000458703 648 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AL133372.1-201ENST00000493565 745 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AP000926.3-201ENST00000497201 299 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.79□□□□□ -1.64
PKNOX1P55347 COX6B1P5-201ENST00000509843 249 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AC026688.1-201ENST00000520639 1168 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.79□□□□□ -1.64
PKNOX1P55347 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.79□□□□□ -1.64
PKNOX1P55347 OR7E128P-201ENST00000532736 1024 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.79□□□□□ -1.64
PKNOX1P55347 AC084759.1-201ENST00000561168 290 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PKNOX1P55347 TVP23CP2-201ENST00000571473 623 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 EIF1P5-201ENST00000585002 234 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AC011447.4-201ENST00000587562 111 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AP002884.5-201ENST00000595053 1132 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AC005377.1-201ENST00000605126 456 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AF117829.2-201ENST00000619538 361 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AC008115.4-201ENST00000619780 775 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 AC019206.1-201ENST00000621938 425 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PKNOX1P55347 AP002505.2-201ENST00000623585 696 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PKNOX1P55347 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 THAP12P8-201ENST00000447914 2115 ntBASIC4.79□□□□□ -1.64
PKNOX1P55347 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.79□□□□□ -1.64
PKNOX1P55347 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.79□□□□□ -1.64
PKNOX1P55347 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.79□□□□□ -1.64
PKNOX1P55347 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.79□□□□□ -1.64
PKNOX1P55347 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PKNOX1P55347 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.79□□□□□ -1.64
PKNOX1P55347 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
PKNOX1P55347 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.78□□□□□ -1.64
PKNOX1P55347 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PKNOX1P55347 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PKNOX1P55347 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PKNOX1P55347 AC008549.2-201ENST00000333482 706 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms