Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 AC113412.1-201ENST00000425840 504 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC093422.3-201ENST00000428506 305 ntBASIC5.03□□□□□ -1.6
CDH12P55289 HSPD1P12-201ENST00000429127 1069 ntBASIC5.03□□□□□ -1.6
CDH12P55289 MTND2P5-201ENST00000432656 1006 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC090018.1-201ENST00000434369 367 ntBASIC5.03□□□□□ -1.6
CDH12P55289 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDH12P55289 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 AC023512.1-201ENST00000444513 499 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC005297.1-201ENST00000444765 862 ntBASIC5.03□□□□□ -1.6
CDH12P55289 EIF2S2P2-201ENST00000447161 982 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH12P55289 AL031313.1-201ENST00000448435 256 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH12P55289 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH12P55289 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH12P55289 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH12P55289 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH12P55289 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.03□□□□□ -1.6
CDH12P55289 AC021146.5-201ENST00000503544 545 ntBASIC5.03□□□□□ -1.6
CDH12P55289 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH12P55289 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH12P55289 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 IMPA1P1-201ENST00000510718 842 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC016559.2-201ENST00000510759 359 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH12P55289 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH12P55289 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH12P55289 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH12P55289 AC013701.1-201ENST00000522657 465 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH12P55289 CYB5AP5-201ENST00000549779 389 ntBASIC5.03□□□□□ -1.6
CDH12P55289 OR11H3P-201ENST00000554547 982 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH12P55289 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH12P55289 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH12P55289 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH12P55289 MTCYBP13-201ENST00000578634 1093 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC134669.1-201ENST00000581275 672 ntBASIC5.03□□□□□ -1.6
CDH12P55289 RN7SL622P-201ENST00000585292 275 ntBASIC5.03□□□□□ -1.6
CDH12P55289 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CDH12P55289 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH12P55289 AL450336.1-201ENST00000605180 586 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC108865.2-201ENST00000606881 432 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC012557.1-201ENST00000607115 611 ntBASIC5.03□□□□□ -1.6
CDH12P55289 RNU4-5P-201ENST00000607255 135 ntBASIC5.03□□□□□ -1.6
CDH12P55289 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH12P55289 AC135068.5-201ENST00000624197 983 ntBASIC5.03□□□□□ -1.6
CDH12P55289 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH12P55289 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH12P55289 AC008691.1-209ENST00000642094 814 ntBASIC5.03□□□□□ -1.6
CDH12P55289 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CDH12P55289 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDH12P55289 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH12P55289 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CDH12P55289 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH12P55289 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH12P55289 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH12P55289 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH12P55289 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH12P55289 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CDH12P55289 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH12P55289 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.02□□□□□ -1.61
CDH12P55289 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CDH12P55289 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH12P55289 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH12P55289 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH12P55289 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH12P55289 SNORA48.4-201ENST00000391089 134 ntBASIC5.02□□□□□ -1.61
CDH12P55289 CHMP1B2P-201ENST00000399581 597 ntBASIC5.02□□□□□ -1.61
CDH12P55289 LYPLA1P3-201ENST00000402650 695 ntBASIC5.02□□□□□ -1.61
CDH12P55289 VN1R12P-201ENST00000403778 876 ntBASIC5.02□□□□□ -1.61
CDH12P55289 RN7SKP240-201ENST00000410583 375 ntBASIC5.02□□□□□ -1.61
CDH12P55289 OR51B3P-201ENST00000412287 913 ntBASIC5.02□□□□□ -1.61
CDH12P55289 RPL12P9-201ENST00000412942 488 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AL592310.1-201ENST00000414330 671 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AL590806.1-201ENST00000415818 853 ntBASIC5.02□□□□□ -1.61
CDH12P55289 VPS26BP1-201ENST00000417155 755 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH12P55289 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH12P55289 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH12P55289 MGAT2P2-201ENST00000427194 797 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH12P55289 AC005189.1-201ENST00000431286 310 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AL161722.1-201ENST00000446972 1032 ntBASIC5.02□□□□□ -1.61
CDH12P55289 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH12P55289 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH12P55289 PRPF38AP1-201ENST00000451976 933 ntBASIC5.02□□□□□ -1.61
CDH12P55289 LRRC37A14P-201ENST00000452297 462 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AC245028.2-201ENST00000458673 253 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.02□□□□□ -1.61
CDH12P55289 MYL12BP2-201ENST00000503948 512 ntBASIC5.02□□□□□ -1.61
CDH12P55289 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH12P55289 RN7SKP287-201ENST00000516546 266 ntBASIC5.02□□□□□ -1.61
CDH12P55289 SNORA31.13-201ENST00000516624 135 ntBASIC5.02□□□□□ -1.61
CDH12P55289 RNU6-1308P-201ENST00000516817 103 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms