Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH11P55287 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH11P55287 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH11P55287 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH11P55287 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
CDH11P55287 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH11P55287 MTND5P23-201ENST00000430812 1655 ntBASIC4.84□□□□□ -1.63
CDH11P55287 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH11P55287 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH11P55287 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH11P55287 RN7SKP74-201ENST00000362849 309 ntBASIC4.84□□□□□ -1.63
CDH11P55287 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CDH11P55287 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CDH11P55287 AC009804.1-201ENST00000400949 179 ntBASIC4.84□□□□□ -1.63
CDH11P55287 DBIP1-201ENST00000401435 260 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH11P55287 Z93019.1-201ENST00000416450 973 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH11P55287 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH11P55287 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH11P55287 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH11P55287 BRWD1P3-201ENST00000428816 390 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH11P55287 RPL12P17-201ENST00000432393 498 ntBASIC4.84□□□□□ -1.63
CDH11P55287 LYPLA1P1-201ENST00000434514 622 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH11P55287 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH11P55287 AL163193.1-201ENST00000444895 788 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH11P55287 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.84□□□□□ -1.63
CDH11P55287 AL606490.1-201ENST00000452266 765 ntBASIC4.84□□□□□ -1.63
CDH11P55287 RPL7P39-201ENST00000481157 744 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH11P55287 RN7SL205P-201ENST00000490174 284 ntBASIC4.84□□□□□ -1.63
CDH11P55287 OR9N1P-202ENST00000494289 481 ntBASIC4.84□□□□□ -1.63
CDH11P55287 RPL15P21-201ENST00000495592 567 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AC090638.1-201ENST00000498296 909 ntBASIC4.84□□□□□ -1.63
CDH11P55287 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CDH11P55287 AC008638.1-201ENST00000506035 866 ntBASIC4.84□□□□□ -1.63
CDH11P55287 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.84□□□□□ -1.63
CDH11P55287 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH11P55287 RNA5SP34-201ENST00000516887 130 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.84□□□□□ -1.63
CDH11P55287 SETP1-201ENST00000556014 845 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH11P55287 AC016180.1-201ENST00000567945 403 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AC022884.2-201ENST00000578535 580 ntBASIC4.84□□□□□ -1.63
CDH11P55287 OR7E18P-201ENST00000592589 702 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AC010245.2-201ENST00000606908 1167 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AC110792.4-201ENST00000609843 298 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AC008115.4-201ENST00000619780 775 ntBASIC4.84□□□□□ -1.63
CDH11P55287 AC022306.3-201ENST00000619930 550 ntBASIC4.84□□□□□ -1.63
CDH11P55287 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH11P55287 AC132068.1-201ENST00000623805 459 ntBASIC4.84□□□□□ -1.63
CDH11P55287 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH11P55287 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH11P55287 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH11P55287 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH11P55287 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH11P55287 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH11P55287 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH11P55287 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH11P55287 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH11P55287 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.64
CDH11P55287 AC114947.2-201ENST00000565748 2125 ntBASIC4.84□□□□□ -1.64
CDH11P55287 AC104260.2-201ENST00000623551 3497 ntBASIC4.84□□□□□ -1.64
CDH11P55287 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDH11P55287 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CDH11P55287 LINC01963-201ENST00000562038 3148 ntBASIC4.83□□□□□ -1.64
CDH11P55287 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH11P55287 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.83□□□□□ -1.64
CDH11P55287 SAMMSON-213ENST00000641336 1521 ntBASIC4.83□□□□□ -1.64
CDH11P55287 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH11P55287 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH11P55287 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH11P55287 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH11P55287 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH11P55287 OR4K17-201ENST00000315543 1032 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AC017079.1-201ENST00000333650 415 ntBASIC4.83□□□□□ -1.64
CDH11P55287 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDH11P55287 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH11P55287 SNORA63.3-201ENST00000362682 132 ntBASIC4.83□□□□□ -1.64
CDH11P55287 RNA5SP234-201ENST00000363916 119 ntBASIC4.83□□□□□ -1.64
CDH11P55287 RN7SKP6-201ENST00000364795 319 ntBASIC4.83□□□□□ -1.64
CDH11P55287 RN7SKP153-201ENST00000365026 316 ntBASIC4.83□□□□□ -1.64
CDH11P55287 RNU6-650P-201ENST00000365658 111 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AL035405.1-201ENST00000400795 710 ntBASIC4.83□□□□□ -1.64
CDH11P55287 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.83□□□□□ -1.64
CDH11P55287 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 RN7SKP278-201ENST00000410504 342 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH11P55287 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDH11P55287 AC016769.2-201ENST00000414815 475 ntBASIC4.83□□□□□ -1.64
CDH11P55287 SEC63P1-201ENST00000425785 1258 ntBASIC4.83□□□□□ -1.64
CDH11P55287 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH11P55287 OR6D1P-201ENST00000436165 939 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH11P55287 CYCSP24-201ENST00000445119 316 ntBASIC4.83□□□□□ -1.64
CDH11P55287 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH11P55287 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms