Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.21□□□□□ -1.58
CLCNKAP51800 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCNKAP51800 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCNKAP51800 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLCNKAP51800 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCNKAP51800 TRIM51GP-201ENST00000534741 1350 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLCNKAP51800 SNORA17.1-201ENST00000362945 126 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 SNORA70.6-201ENST00000383934 134 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 RNU6-925P-201ENST00000384629 104 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CLCNKAP51800 RN7SKP273-201ENST00000411392 314 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.21□□□□□ -1.58
CLCNKAP51800 MTCO2P1-201ENST00000424648 477 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCNKAP51800 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.21□□□□□ -1.58
CLCNKAP51800 AL606490.7-201ENST00000433136 191 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 AC007563.3-201ENST00000433233 371 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.21□□□□□ -1.58
CLCNKAP51800 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCNKAP51800 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CLCNKAP51800 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCNKAP51800 EEF1B2P5-201ENST00000444820 548 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCNKAP51800 AC023271.1-201ENST00000445936 1090 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCNKAP51800 DNAJB5P1-201ENST00000454004 806 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 AC005532.2-201ENST00000467154 373 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 MTCO2P9-201ENST00000503214 694 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 AC093770.1-201ENST00000511559 571 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCNKAP51800 HMGN1P9-201ENST00000515212 298 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 SEPT10P1-201ENST00000517342 1162 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCNKAP51800 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCNKAP51800 AC068339.2-201ENST00000534395 618 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.21□□□□□ -1.58
CLCNKAP51800 NOP56P3-201ENST00000549457 385 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 AC018552.1-201ENST00000562099 811 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 AC016180.1-201ENST00000567945 403 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLCNKAP51800 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.21□□□□□ -1.58
CLCNKAP51800 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCNKAP51800 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.21□□□□□ -1.58
CLCNKAP51800 AC004775.1-201ENST00000607389 753 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 AL139407.1-201ENST00000613826 1175 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 AC018445.2-201ENST00000622987 260 ntBASIC5.21□□□□□ -1.58
CLCNKAP51800 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLCNKAP51800 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCNKAP51800 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
CLCNKAP51800 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCNKAP51800 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCNKAP51800 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLCNKAP51800 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLCNKAP51800 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLCNKAP51800 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 STX3-208ENST00000641815 3236 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.2□□□□□ -1.58
CLCNKAP51800 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLCNKAP51800 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLCNKAP51800 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CLCNKAP51800 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCNKAP51800 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCNKAP51800 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCNKAP51800 OR4K17-201ENST00000315543 1032 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCNKAP51800 RNU1-43P-201ENST00000365052 165 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 RNU6-609P-201ENST00000365459 107 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 RNU6-650P-201ENST00000365658 111 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 RNA5SP105-201ENST00000391123 113 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 RSL24D1P1-201ENST00000404972 493 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 SPTLC1P2-201ENST00000407089 121 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCNKAP51800 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCNKAP51800 BRWD1P3-201ENST00000428816 390 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCNKAP51800 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCNKAP51800 AC006326.1-201ENST00000445465 787 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AL157884.3-201ENST00000448273 1184 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 HMGN1P5-201ENST00000448591 263 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 CCRL1P1-201ENST00000449542 1053 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AURKAPS1-201ENST00000451805 1212 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCNKAP51800 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCNKAP51800 Z92846.1-201ENST00000456203 268 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 FCF1P6-201ENST00000456841 595 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCNKAP51800 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCNKAP51800 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCNKAP51800 MTATP6P9-201ENST00000515039 680 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 AC016550.3-201ENST00000515706 767 ntBASIC5.2□□□□□ -1.58
CLCNKAP51800 RNU6-415P-201ENST00000516252 97 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms