Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-1P43699 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-1P43699 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-1P43699 RPS4XP12-201ENST00000461747 709 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.45□□□□□ -1.7
NKX2-1P43699 AL122020.1-201ENST00000472287 459 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-1P43699 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-1P43699 PPM1AP1-201ENST00000502740 1135 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AC111193.1-201ENST00000504097 155 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-1P43699 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-1P43699 AC018797.1-201ENST00000510791 255 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-1P43699 AC110760.3-202ENST00000515177 371 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AP001372.4-201ENST00000524889 472 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AP003396.4-201ENST00000527574 265 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-1P43699 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-1P43699 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-1P43699 AL049830.4-201ENST00000555149 351 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AC006530.1-201ENST00000555980 571 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-1P43699 RPA2P1-201ENST00000556557 721 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-1P43699 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-1P43699 OR1AB1P-201ENST00000585564 761 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AC090236.2-201ENST00000587933 1101 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-1P43699 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-1P43699 MIR6809-201ENST00000612189 116 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AC245014.3-201ENST00000618589 347 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 AC004808.1-201ENST00000627671 721 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-1P43699 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NKX2-1P43699 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NKX2-1P43699 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NKX2-1P43699 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-1P43699 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NKX2-1P43699 MRE11P1-201ENST00000464884 2127 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-1P43699 AL645568.2-201ENST00000432815 1337 ntBASIC4.45□□□□□ -1.7
NKX2-1P43699 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-1P43699 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-1P43699 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NKX2-1P43699 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.44□□□□□ -1.7
NKX2-1P43699 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 RNA5SP232-201ENST00000364144 119 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 MIR122-201ENST00000385044 85 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 RNU6-584P-201ENST00000410350 95 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AC069282.1-201ENST00000411911 526 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC023128.2-201ENST00000420880 1223 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AL645638.1-201ENST00000440519 361 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 FHP1-201ENST00000442741 703 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 EEF1B2P3-201ENST00000447718 678 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AL450023.1-201ENST00000450868 751 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AC002553.2-201ENST00000453217 340 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC098847.1-201ENST00000473094 348 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 RPS17P11-201ENST00000474297 293 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 CBX1P5-201ENST00000475330 559 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 RN7SL583P-201ENST00000475692 287 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
NKX2-1P43699 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC021006.1-201ENST00000489849 553 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AC009120.1-201ENST00000493458 473 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-1P43699 AC092349.1-201ENST00000504903 310 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AL158068.1-201ENST00000506116 616 ntBASIC4.44□□□□□ -1.7
NKX2-1P43699 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-1P43699 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms