Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
RFC3P40938 VN1R81P-201ENST00000602085 372 ntBASIC4.65□□□□□ -1.67
RFC3P40938 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.65□□□□□ -1.67
RFC3P40938 AL356608.1-201ENST00000610034 820 ntBASIC4.65□□□□□ -1.67
RFC3P40938 AP005131.7-201ENST00000610087 611 ntBASIC4.65□□□□□ -1.67
RFC3P40938 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.65□□□□□ -1.67
RFC3P40938 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.65□□□□□ -1.67
RFC3P40938 AC073342.3-201ENST00000624211 193 ntBASIC4.65□□□□□ -1.67
RFC3P40938 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.65□□□□□ -1.67
RFC3P40938 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFC3P40938 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFC3P40938 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.65□□□□□ -1.67
RFC3P40938 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.65□□□□□ -1.67
RFC3P40938 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFC3P40938 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RFC3P40938 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RFC3P40938 STX3-208ENST00000641815 3236 ntBASIC4.65□□□□□ -1.67
RFC3P40938 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.65□□□□□ -1.67
RFC3P40938 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.64□□□□□ -1.67
RFC3P40938 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
RFC3P40938 Z95327.2-201ENST00000414579 1873 ntBASIC4.64□□□□□ -1.67
RFC3P40938 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.64□□□□□ -1.67
RFC3P40938 RNA5SP428-201ENST00000365129 132 ntBASIC4.64□□□□□ -1.67
RFC3P40938 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 AL035419.1-201ENST00000397037 564 ntBASIC4.64□□□□□ -1.67
RFC3P40938 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.64□□□□□ -1.67
RFC3P40938 COX6B1P1-201ENST00000415962 213 ntBASIC4.64□□□□□ -1.67
RFC3P40938 AL358176.3-201ENST00000420757 454 ntBASIC4.64□□□□□ -1.67
RFC3P40938 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.64□□□□□ -1.67
RFC3P40938 BX323845.1-201ENST00000432417 179 ntBASIC4.64□□□□□ -1.67
RFC3P40938 RPL19P16-201ENST00000433839 588 ntBASIC4.64□□□□□ -1.67
RFC3P40938 PRPF38AP2-201ENST00000438179 851 ntBASIC4.64□□□□□ -1.67
RFC3P40938 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.64□□□□□ -1.67
RFC3P40938 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.64□□□□□ -1.67
RFC3P40938 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.64□□□□□ -1.67
RFC3P40938 IGLV2-34-201ENST00000490007 283 ntBASIC4.64□□□□□ -1.67
RFC3P40938 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 RN7SL244P-201ENST00000493405 297 ntBASIC4.64□□□□□ -1.67
RFC3P40938 AC140172.1-201ENST00000502928 141 ntBASIC4.64□□□□□ -1.67
RFC3P40938 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.64□□□□□ -1.67
RFC3P40938 AC098976.1-201ENST00000513014 541 ntBASIC4.64□□□□□ -1.67
RFC3P40938 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.64□□□□□ -1.67
RFC3P40938 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.64□□□□□ -1.67
RFC3P40938 OR7E128P-201ENST00000532736 1024 ntBASIC4.64□□□□□ -1.67
RFC3P40938 AC025423.2-201ENST00000537570 439 ntBASIC4.64□□□□□ -1.67
RFC3P40938 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.64□□□□□ -1.67
RFC3P40938 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.64□□□□□ -1.67
RFC3P40938 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.64□□□□□ -1.67
RFC3P40938 RN7SL435P-201ENST00000584418 282 ntBASIC4.64□□□□□ -1.67
RFC3P40938 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 AC011487.3-201ENST00000593607 453 ntBASIC4.64□□□□□ -1.67
RFC3P40938 AL031320.1-201ENST00000604177 357 ntBASIC4.64□□□□□ -1.67
RFC3P40938 MEMO1P5-201ENST00000604810 406 ntBASIC4.64□□□□□ -1.67
RFC3P40938 AC067838.1-201ENST00000606064 577 ntBASIC4.64□□□□□ -1.67
RFC3P40938 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 AC022106.2-201ENST00000620114 757 ntBASIC4.64□□□□□ -1.67
RFC3P40938 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.64□□□□□ -1.67
RFC3P40938 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.64□□□□□ -1.67
RFC3P40938 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.64□□□□□ -1.67
RFC3P40938 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFC3P40938 AL022393.1-201ENST00000625142 1677 ntBASIC4.64□□□□□ -1.67
RFC3P40938 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.63□□□□□ -1.67
RFC3P40938 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RFC3P40938 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFC3P40938 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RFC3P40938 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFC3P40938 AC007996.1-201ENST00000620414 2821 ntBASIC4.63□□□□□ -1.67
RFC3P40938 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFC3P40938 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RFC3P40938 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RFC3P40938 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
RFC3P40938 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFC3P40938 AL672167.2-201ENST00000377164 879 ntBASIC4.63□□□□□ -1.67
RFC3P40938 RNU1-74P-201ENST00000384108 171 ntBASIC4.63□□□□□ -1.67
RFC3P40938 SNORA79B-201ENST00000410557 148 ntBASIC4.63□□□□□ -1.67
RFC3P40938 Y_RNA.625-201ENST00000411256 107 ntBASIC4.63□□□□□ -1.67
RFC3P40938 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.63□□□□□ -1.67
RFC3P40938 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.63□□□□□ -1.67
RFC3P40938 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.63□□□□□ -1.67
RFC3P40938 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.63□□□□□ -1.67
RFC3P40938 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms