Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD13P35453 AC114947.2-201ENST00000565748 2125 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 AL590763.1-201ENST00000398297 1545 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXD13P35453 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXD13P35453 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 CASC19-221ENST00000641309 1382 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 CIR1P2-201ENST00000514821 1342 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HOXD13P35453 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 RPL23P2-201ENST00000320371 421 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 RNU6-666P-201ENST00000363499 107 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 RNU1-106P-201ENST00000384382 164 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 MIR1178-201ENST00000408396 91 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 U3.36-201ENST00000408418 213 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 AC073464.3-201ENST00000422564 712 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD13P35453 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD13P35453 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXD13P35453 EEF1B2P5-201ENST00000444820 548 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.6□□□□□ -1.51
HOXD13P35453 KNOP1P3-201ENST00000446933 426 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 PSMC1P13-201ENST00000458195 985 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 AC245028.2-201ENST00000458673 253 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 AC090114.3-201ENST00000479267 829 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 RN7SL30P-201ENST00000488416 306 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 RNA5SP34-201ENST00000516887 130 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 AC138832.1-201ENST00000522871 556 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD13P35453 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXD13P35453 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD13P35453 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD13P35453 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXD13P35453 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD13P35453 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD13P35453 AC010503.3-201ENST00000594355 540 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 SUMO2P15-201ENST00000604285 278 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXD13P35453 AL627230.1-201ENST00000613077 211 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 AL591926.8-201ENST00000616876 211 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 AC020923.1-201ENST00000624021 917 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.6□□□□□ -1.51
HOXD13P35453 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXD13P35453 LINC01739-205ENST00000641890 573 ntBASIC5.6□□□□□ -1.51
HOXD13P35453 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD13P35453 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HOXD13P35453 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HOXD13P35453 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD13P35453 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD13P35453 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.59□□□□□ -1.51
HOXD13P35453 AL359715.4-201ENST00000606629 1436 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD13P35453 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
HOXD13P35453 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HOXD13P35453 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HOXD13P35453 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HOXD13P35453 U8.4-201ENST00000363626 134 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HOXD13P35453 MIR223-201ENST00000385204 110 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 RNA5SP498-201ENST00000411342 120 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD13P35453 GNG5P5-201ENST00000420444 220 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD13P35453 MTND2P2-201ENST00000434633 945 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HOXD13P35453 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD13P35453 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD13P35453 AL353718.1-201ENST00000451028 517 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 AURKAPS1-201ENST00000451805 1212 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.59□□□□□ -1.51
HOXD13P35453 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXD13P35453 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.59□□□□□ -1.51
HOXD13P35453 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD13P35453 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD13P35453 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD13P35453 SULT1C2P2-201ENST00000562517 294 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 AC233266.2-201ENST00000567067 528 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD13P35453 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXD13P35453 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD13P35453 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXD13P35453 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD13P35453 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXD13P35453 AC025016.1-201ENST00000616746 682 ntBASIC5.59□□□□□ -1.51
HOXD13P35453 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXD13P35453 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXD13P35453 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXD13P35453 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms