Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA3P32297 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA3P32297 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA3P32297 AC006484.1-201ENST00000435086 1884 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNA3P32297 U3.3-201ENST00000362986 216 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 AL359643.1-201ENST00000404109 423 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA3P32297 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA3P32297 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA3P32297 ARAFP1-201ENST00000422172 605 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA3P32297 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA3P32297 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA3P32297 CEACAMP7-201ENST00000444105 496 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 AC093166.2-201ENST00000455969 1017 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNA3P32297 AL591473.1-201ENST00000464297 313 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNA3P32297 RPL7AP6-201ENST00000477943 801 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 BX284632.1-201ENST00000478218 541 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 AC020779.1-201ENST00000478757 796 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 AC109462.1-201ENST00000491087 368 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA3P32297 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA3P32297 ENPP7P9-201ENST00000514456 627 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 AC138938.1-201ENST00000515431 782 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.31□□□□□ -1.56
CHRNA3P32297 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA3P32297 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA3P32297 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.31□□□□□ -1.56
CHRNA3P32297 AC116553.2-201ENST00000564203 463 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 FAM106CP-201ENST00000582212 507 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA3P32297 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA3P32297 AC087763.1-201ENST00000603391 286 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 AL135786.2-201ENST00000608422 615 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA3P32297 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA3P32297 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
CHRNA3P32297 CASC19-222ENST00000641321 1173 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 LINC01739-205ENST00000641890 573 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNA3P32297 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNA3P32297 RBPJP2-201ENST00000618187 1444 ntBASIC5.31□□□□□ -1.56
CHRNA3P32297 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA3P32297 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.3□□□□□ -1.56
CHRNA3P32297 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CHRNA3P32297 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CHRNA3P32297 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CHRNA3P32297 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
CHRNA3P32297 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.3□□□□□ -1.56
CHRNA3P32297 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CHRNA3P32297 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 RN7SKP74-201ENST00000362849 309 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 SNORA2.3-201ENST00000383920 135 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 NUDT19P3-201ENST00000404698 555 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 MIR1271-201ENST00000408537 86 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 RPL36AP10-201ENST00000421785 322 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.3□□□□□ -1.56
CHRNA3P32297 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 AL031584.1-201ENST00000447169 754 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.3□□□□□ -1.56
CHRNA3P32297 AL356390.1-201ENST00000455684 397 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 RN7SL329P-201ENST00000467740 299 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 AC093270.2-201ENST00000486157 792 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 RN7SKP66-201ENST00000516681 231 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 FTH1P11-201ENST00000517577 551 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.3□□□□□ -1.56
CHRNA3P32297 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 AC107905.1-201ENST00000616204 426 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 AL590410.1-201ENST00000617925 333 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 AC068870.2-201ENST00000620635 389 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 AC015871.5-202ENST00000623252 701 ntBASIC5.3□□□□□ -1.56
CHRNA3P32297 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CHRNA3P32297 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA3P32297 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CHRNA3P32297 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms