Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL158827.1-201ENST00000416300 391 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 AC093084.1-201ENST00000424233 687 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 AC090018.1-201ENST00000434369 367 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HOXC8P31273 AC023271.1-201ENST00000445936 1090 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 GAPDHP14-201ENST00000450472 937 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 OR52A4P-202ENST00000481634 799 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXC8P31273 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXC8P31273 RNA5SP392-201ENST00000516905 112 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 AC104997.1-201ENST00000519761 717 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXC8P31273 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXC8P31273 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXC8P31273 AL512310.9-201ENST00000553311 948 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXC8P31273 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.56□□□□□ -1.52
HOXC8P31273 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXC8P31273 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXC8P31273 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 AL354696.1-201ENST00000614652 497 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
HOXC8P31273 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 MIR7641-1-201ENST00000627518 61 ntBASIC5.56□□□□□ -1.52
HOXC8P31273 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXC8P31273 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC8P31273 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC8P31273 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC8P31273 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC8P31273 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC8P31273 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HOXC8P31273 AC083799.1-201ENST00000366451 910 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AL021331.1-201ENST00000402817 582 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AL136116.2-201ENST00000404020 785 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 GTF2IP5-201ENST00000414608 731 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 MTND2P11-201ENST00000423638 648 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC8P31273 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC8P31273 RPL19P16-201ENST00000433839 588 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AL157884.3-201ENST00000448273 1184 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 RPL5P22-201ENST00000480199 884 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AC011005.3-201ENST00000491624 395 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 RN7SL441P-201ENST00000492388 296 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AC111000.6-201ENST00000514471 709 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC8P31273 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC8P31273 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC8P31273 MORF4L1P3-201ENST00000525966 950 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC8P31273 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC8P31273 AP006289.1-201ENST00000538089 277 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC8P31273 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC8P31273 AC122134.1-201ENST00000565664 1104 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 TMF1P1-201ENST00000576058 373 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC8P31273 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 AF230666.2-201ENST00000602328 725 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AC020910.3-201ENST00000603701 874 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 AC074140.1-201ENST00000621617 208 ntBASIC5.55□□□□□ -1.52
HOXC8P31273 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC8P31273 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HOXC8P31273 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HOXC8P31273 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXC8P31273 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC8P31273 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC8P31273 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC8P31273 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC8P31273 AC068870.3-201ENST00000625077 2536 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HOXC8P31273 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
HOXC8P31273 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HOXC8P31273 RNU1-32P-201ENST00000363937 159 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 RNA5SP505-201ENST00000364748 108 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC8P31273 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC8P31273 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC8P31273 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC8P31273 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC8P31273 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC8P31273 TPT1P13-201ENST00000449760 499 ntBASIC5.54□□□□□ -1.52
HOXC8P31273 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC8P31273 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC8P31273 RN7SL205P-201ENST00000490174 284 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms