Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL8A1P27658 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COL8A1P27658 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL8A1P27658 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC6.42□□□□□ -1.38
COL8A1P27658 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
COL8A1P27658 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.42□□□□□ -1.38
COL8A1P27658 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
COL8A1P27658 COL6A4P1-202ENST00000487147 4317 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC6.42□□□□□ -1.38
COL8A1P27658 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COL8A1P27658 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.42□□□□□ -1.38
COL8A1P27658 AC032011.1-201ENST00000611703 1549 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC6.42□□□□□ -1.38
COL8A1P27658 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.42□□□□□ -1.38
COL8A1P27658 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL8A1P27658 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 RNU6-543P-201ENST00000362576 108 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 Y_RNA.112-201ENST00000363250 102 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 SNORA64.3-201ENST00000365647 134 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 SNORA7A-201ENST00000384765 139 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 RPL23AP29-201ENST00000397284 453 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AL391419.1-201ENST00000398901 1275 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AL133260.1-201ENST00000405720 405 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 RNA5SP155-201ENST00000411154 129 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 RNA5SP280-201ENST00000411230 115 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 HMGB3P2-201ENST00000411913 584 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.42□□□□□ -1.38
COL8A1P27658 RPL7P57-201ENST00000423238 740 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC005517.2-201ENST00000424673 553 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.42□□□□□ -1.38
COL8A1P27658 RPL31P35-201ENST00000431058 377 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COL8A1P27658 LSM3P3-201ENST00000436601 306 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 SKP1P1-201ENST00000438081 489 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.42□□□□□ -1.38
COL8A1P27658 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.42□□□□□ -1.38
COL8A1P27658 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.42□□□□□ -1.38
COL8A1P27658 AL445991.1-201ENST00000450381 475 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 HIGD1AP16-201ENST00000450986 258 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 RPS3AP50-201ENST00000487064 803 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 AC138409.2-202ENST00000507274 458 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC011411.1-201ENST00000509592 876 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 RNA5SP518-201ENST00000515957 119 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 RNA5SP216-201ENST00000516111 123 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 RNU6-764P-201ENST00000516396 105 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 RNU6-1314P-201ENST00000517139 104 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.42□□□□□ -1.38
COL8A1P27658 TPM3P3-201ENST00000521343 354 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 AP001803.1-201ENST00000525668 147 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.42□□□□□ -1.38
COL8A1P27658 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.42□□□□□ -1.38
COL8A1P27658 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.42□□□□□ -1.38
COL8A1P27658 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.42□□□□□ -1.38
COL8A1P27658 MIR4732-201ENST00000581873 76 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC090236.2-201ENST00000587933 1101 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.42□□□□□ -1.38
COL8A1P27658 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC233309.1-201ENST00000619522 751 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 uc_338.21-201ENST00000622458 147 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC099494.2-201ENST00000623371 978 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC244517.12-201ENST00000623581 663 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC138627.2-201ENST00000624202 601 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC026336.5-201ENST00000624455 738 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AL049541.2-201ENST00000626377 555 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL8A1P27658 OR7E161P-202ENST00000641994 1033 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 MFSD8-218ENST00000641186 4448 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 AC090983.1-201ENST00000623426 3897 ntBASIC6.42□□□□□ -1.38
COL8A1P27658 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
COL8A1P27658 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
COL8A1P27658 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 GANC-206ENST00000566442 2512 ntTSL 2 BASIC6.42□□□□□ -1.38
COL8A1P27658 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
COL8A1P27658 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.42□□□□□ -1.38
COL8A1P27658 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL8A1P27658 AC016831.3-201ENST00000446451 1723 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms