Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TNFSF4P23510 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
TNFSF4P23510 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TNFSF4P23510 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFSF4P23510 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.26□□□□□ -1.57
TNFSF4P23510 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TNFSF4P23510 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.25□□□□□ -1.57
TNFSF4P23510 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TNFSF4P23510 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.25□□□□□ -1.57
TNFSF4P23510 AC119751.3-201ENST00000399720 670 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 AL132875.1-201ENST00000403623 949 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 GCNT1P4-201ENST00000404096 329 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 PRRC2CP1-201ENST00000404428 159 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 AL590084.1-201ENST00000407885 387 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 RNA5SP251-201ENST00000410614 137 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 HMGA1P8-201ENST00000414130 321 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFSF4P23510 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFSF4P23510 AL590609.2-201ENST00000421430 368 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFSF4P23510 RPL12P34-201ENST00000424532 479 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFSF4P23510 MRPS21P2-201ENST00000424704 264 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFSF4P23510 RPS7P14-201ENST00000426405 583 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFSF4P23510 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.25□□□□□ -1.57
TNFSF4P23510 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFSF4P23510 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFSF4P23510 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFSF4P23510 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.25□□□□□ -1.57
TNFSF4P23510 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.25□□□□□ -1.57
TNFSF4P23510 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.25□□□□□ -1.57
TNFSF4P23510 AC002553.3-201ENST00000453002 341 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFSF4P23510 PNPLA4P1-201ENST00000458328 305 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 RN7SL352P-201ENST00000466002 277 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 RN7SL221P-201ENST00000466190 281 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 AC011979.1-201ENST00000472300 483 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 MTND6P6-201ENST00000478031 263 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFSF4P23510 RFPL4AP5-201ENST00000514977 504 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 RN7SKP70-201ENST00000516655 271 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFSF4P23510 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFSF4P23510 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.25□□□□□ -1.57
TNFSF4P23510 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.25□□□□□ -1.57
TNFSF4P23510 AC024405.1-201ENST00000532521 1042 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.25□□□□□ -1.57
TNFSF4P23510 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.25□□□□□ -1.57
TNFSF4P23510 OR4H6P-201ENST00000563771 921 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFSF4P23510 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.25□□□□□ -1.57
TNFSF4P23510 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFSF4P23510 AC009318.3-201ENST00000616916 503 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 AC243756.2-201ENST00000618406 463 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 AC073488.6-201ENST00000632293 754 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 AC097655.1-201ENST00000635075 318 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
TNFSF4P23510 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.25□□□□□ -1.57
TNFSF4P23510 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFSF4P23510 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 MTND4P8-201ENST00000514997 1362 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
TNFSF4P23510 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 AL121839.2-201ENST00000565058 6943 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TNFSF4P23510 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFSF4P23510 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TNFSF4P23510 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TNFSF4P23510 AP001541.1-201ENST00000623322 1904 ntBASIC5.25□□□□□ -1.57
TNFSF4P23510 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.25□□□□□ -1.57
TNFSF4P23510 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TNFSF4P23510 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms