Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC109780.2-201ENST00000413467 845 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 FCF1P2-201ENST00000415284 583 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AL161742.1-201ENST00000418154 584 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.9□□□□□ -1.3
NFKB1P19838 RPS27AP14-201ENST00000422868 454 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AL356583.2-201ENST00000426536 280 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.9□□□□□ -1.3
NFKB1P19838 VDAC1P6-201ENST00000430062 855 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.9□□□□□ -1.3
NFKB1P19838 AL590128.1-201ENST00000433407 286 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.9□□□□□ -1.3
NFKB1P19838 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.9□□□□□ -1.3
NFKB1P19838 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.9□□□□□ -1.3
NFKB1P19838 PMS2P9-201ENST00000441237 515 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.9□□□□□ -1.3
NFKB1P19838 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.9□□□□□ -1.3
NFKB1P19838 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.9□□□□□ -1.3
NFKB1P19838 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.9□□□□□ -1.3
NFKB1P19838 RAD23BP3-201ENST00000454157 1152 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 RN7SL390P-201ENST00000470634 284 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 RN7SL654P-201ENST00000479178 292 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.9□□□□□ -1.3
NFKB1P19838 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NFKB1P19838 RPL15P21-201ENST00000495592 567 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AC108078.3-201ENST00000502633 489 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 HMGB1P29-201ENST00000505659 499 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 SNX18P23-201ENST00000510867 677 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.9□□□□□ -1.3
NFKB1P19838 SNORA18.6-201ENST00000516792 115 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.9□□□□□ -1.3
NFKB1P19838 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.9□□□□□ -1.3
NFKB1P19838 AC087752.2-201ENST00000521219 281 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.9□□□□□ -1.3
NFKB1P19838 AC068305.2-201ENST00000550567 1205 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.9□□□□□ -1.3
NFKB1P19838 AC004232.1-201ENST00000571388 208 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AC137800.2-201ENST00000574375 120 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AC136618.2-201ENST00000575091 400 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 RN7SL199P-201ENST00000578752 281 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 RN7SL656P-201ENST00000579044 281 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 RN7SL404P-201ENST00000582421 281 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AC010928.3-201ENST00000587712 541 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.9□□□□□ -1.3
NFKB1P19838 KC877982.1-201ENST00000602313 470 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AL596327.1-201ENST00000603629 213 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.9□□□□□ -1.3
NFKB1P19838 MLECP1-201ENST00000615893 709 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 OR1N1-202ENST00000619659 939 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 AL132796.3-201ENST00000624703 900 ntBASIC6.9□□□□□ -1.3
NFKB1P19838 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.9□□□□□ -1.3
NFKB1P19838 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.9□□□□□ -1.3
NFKB1P19838 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.9□□□□□ -1.3
NFKB1P19838 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NFKB1P19838 CYP1D1P-201ENST00000416662 1433 ntBASIC6.9□□□□□ -1.31
NFKB1P19838 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NFKB1P19838 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NFKB1P19838 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
NFKB1P19838 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NFKB1P19838 AC090229.1-201ENST00000590983 1609 ntBASIC6.9□□□□□ -1.31
NFKB1P19838 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.89□□□□□ -1.31
NFKB1P19838 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.89□□□□□ -1.31
NFKB1P19838 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NFKB1P19838 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NFKB1P19838 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NFKB1P19838 EI24P3-201ENST00000399046 1062 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 OR2W4P-201ENST00000406496 926 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.89□□□□□ -1.31
NFKB1P19838 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.89□□□□□ -1.31
NFKB1P19838 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.89□□□□□ -1.31
NFKB1P19838 GAPDHP49-201ENST00000421421 961 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 GAPDHP57-201ENST00000424400 585 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.89□□□□□ -1.31
NFKB1P19838 PUDPP2-201ENST00000431423 643 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
NFKB1P19838 FTH1P16-201ENST00000435241 552 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 LDHAP2-201ENST00000437325 985 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.89□□□□□ -1.31
NFKB1P19838 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NFKB1P19838 RN7SL492P-201ENST00000460700 295 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 RPS3AP49-201ENST00000472161 790 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 RPL7AP30-201ENST00000482859 796 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 RPS3AP14-201ENST00000483907 780 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 RN7SL849P-201ENST00000485236 295 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 RN7SL868P-201ENST00000485915 303 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 RN7SL561P-201ENST00000488553 281 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.89□□□□□ -1.31
NFKB1P19838 AC021678.1-201ENST00000505195 936 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.89□□□□□ -1.31
NFKB1P19838 AC022447.3-201ENST00000506865 495 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.89□□□□□ -1.31
NFKB1P19838 AC008868.1-201ENST00000509786 737 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.89□□□□□ -1.31
NFKB1P19838 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.89□□□□□ -1.31
NFKB1P19838 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.89□□□□□ -1.31
NFKB1P19838 ARL2BPP2-201ENST00000550907 489 ntBASIC6.89□□□□□ -1.31
NFKB1P19838 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.89□□□□□ -1.31
NFKB1P19838 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.89□□□□□ -1.31
NFKB1P19838 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.89□□□□□ -1.31
NFKB1P19838 AL161729.3-201ENST00000603533 673 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms