Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.99□□□□□ -1.61
XRCC1P18887 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.99□□□□□ -1.61
XRCC1P18887 MRPL35P2-201ENST00000448009 511 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 OR6C72P-201ENST00000451403 892 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 AL591473.1-201ENST00000464297 313 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.99□□□□□ -1.61
XRCC1P18887 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.99□□□□□ -1.61
XRCC1P18887 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.99□□□□□ -1.61
XRCC1P18887 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.99□□□□□ -1.61
XRCC1P18887 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.99□□□□□ -1.61
XRCC1P18887 OR5AZ1P-201ENST00000527448 943 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
XRCC1P18887 AC008126.1-201ENST00000549019 480 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.99□□□□□ -1.61
XRCC1P18887 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.99□□□□□ -1.61
XRCC1P18887 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.99□□□□□ -1.61
XRCC1P18887 BNIP3P32-201ENST00000600015 554 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 AC018695.5-201ENST00000605872 315 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 AC091905.4-201ENST00000623432 202 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
XRCC1P18887 AC008079.2-201ENST00000623543 20396 ntBASIC4.99□□□□□ -1.61
XRCC1P18887 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
XRCC1P18887 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.98□□□□□ -1.61
XRCC1P18887 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.98□□□□□ -1.61
XRCC1P18887 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
XRCC1P18887 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
XRCC1P18887 RNU6-1331P-201ENST00000363658 106 ntBASIC4.98□□□□□ -1.61
XRCC1P18887 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 VN1R31P-201ENST00000417498 730 ntBASIC4.98□□□□□ -1.61
XRCC1P18887 OR6C64P-201ENST00000419708 825 ntBASIC4.98□□□□□ -1.61
XRCC1P18887 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.98□□□□□ -1.61
XRCC1P18887 RN7SL443P-201ENST00000464331 290 ntBASIC4.98□□□□□ -1.61
XRCC1P18887 COX6B1P5-201ENST00000509843 249 ntBASIC4.98□□□□□ -1.61
XRCC1P18887 AL671862.1-201ENST00000515851 349 ntBASIC4.98□□□□□ -1.61
XRCC1P18887 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.98□□□□□ -1.61
XRCC1P18887 OR5D15P-201ENST00000531671 942 ntBASIC4.98□□□□□ -1.61
XRCC1P18887 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.98□□□□□ -1.61
XRCC1P18887 OR7E128P-201ENST00000532736 1024 ntBASIC4.98□□□□□ -1.61
XRCC1P18887 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.98□□□□□ -1.61
XRCC1P18887 AP005432.2-201ENST00000608162 586 ntBASIC4.98□□□□□ -1.61
XRCC1P18887 AC243960.7-201ENST00000623532 707 ntBASIC4.98□□□□□ -1.61
XRCC1P18887 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
XRCC1P18887 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.98□□□□□ -1.61
XRCC1P18887 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
XRCC1P18887 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
XRCC1P18887 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
XRCC1P18887 MTCO1P15-201ENST00000529569 1526 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
XRCC1P18887 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
XRCC1P18887 INTS6P1-201ENST00000504674 2530 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.97□□□□□ -1.61
XRCC1P18887 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
XRCC1P18887 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
XRCC1P18887 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.97□□□□□ -1.61
XRCC1P18887 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.97□□□□□ -1.61
XRCC1P18887 CASC19-221ENST00000641309 1382 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 RNA5SP455-201ENST00000365190 119 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
XRCC1P18887 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.97□□□□□ -1.61
XRCC1P18887 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
XRCC1P18887 AL034379.1-201ENST00000423216 253 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AL590762.4-201ENST00000425885 253 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
XRCC1P18887 RPL7P61-201ENST00000451721 751 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.97□□□□□ -1.61
XRCC1P18887 AL356981.1-201ENST00000454879 684 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AC020779.1-201ENST00000478757 796 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 RPL37AP8-201ENST00000494116 276 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.97□□□□□ -1.61
XRCC1P18887 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.97□□□□□ -1.61
XRCC1P18887 AC110775.1-201ENST00000513721 462 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AC138938.1-201ENST00000515431 782 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.97□□□□□ -1.61
XRCC1P18887 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.97□□□□□ -1.61
XRCC1P18887 NMNAT1P1-201ENST00000554095 876 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.97□□□□□ -1.61
XRCC1P18887 OR1F2P-201ENST00000570470 933 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AP000919.1-201ENST00000582850 985 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.97□□□□□ -1.61
XRCC1P18887 MIR4691-201ENST00000583764 85 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.97□□□□□ -1.61
XRCC1P18887 AC024940.4-201ENST00000605507 246 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AL627230.1-201ENST00000613077 211 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.97□□□□□ -1.61
XRCC1P18887 AL591926.8-201ENST00000616876 211 ntBASIC4.97□□□□□ -1.61
XRCC1P18887 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
XRCC1P18887 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms