Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL6A2P12110 OR1L1-202ENST00000373686 1083 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 Y_RNA.553-201ENST00000384670 102 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.07□□□□□ -1.44
COL6A2P12110 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC092745.2-202ENST00000411880 369 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC245060.4-201ENST00000413293 1121 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC105402.1-201ENST00000413336 545 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 OR6K4P-201ENST00000423179 955 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC012519.1-201ENST00000424588 610 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC112492.2-201ENST00000432774 1030 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC073410.1-201ENST00000435125 589 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 RPS24P1-201ENST00000438550 371 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC234771.4-201ENST00000441416 730 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC079776.3-201ENST00000450665 370 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC073476.1-201ENST00000452854 407 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC239798.3-201ENST00000454459 408 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC114324.2-202ENST00000503812 134 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 LTV1P1-201ENST00000510683 1237 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC079395.1-201ENST00000510981 262 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 CYCSP25-201ENST00000525280 316 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.07□□□□□ -1.44
COL6A2P12110 HIGD1AP10-201ENST00000527837 282 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC092747.2-201ENST00000545069 983 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 BLZF2P-201ENST00000553776 1130 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 AGGF1P7-201ENST00000562369 913 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC006539.2-201ENST00000601729 572 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AL589765.6-201ENST00000601909 549 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 NTAN1P1-201ENST00000603150 646 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 WBP1LP12-201ENST00000604449 331 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 BNIP3P4-201ENST00000604946 565 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC008555.7-201ENST00000605008 583 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC141002.1-201ENST00000607025 279 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC092354.2-201ENST00000607786 514 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AL136097.3-201ENST00000611097 505 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 AC023158.2-201ENST00000614876 543 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 AL138693.1-201ENST00000622219 129 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.07□□□□□ -1.44
COL6A2P12110 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 AC005539.1-201ENST00000443768 1479 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 AC016745.2-201ENST00000608834 3443 ntBASIC6.07□□□□□ -1.44
COL6A2P12110 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.07□□□□□ -1.44
COL6A2P12110 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
COL6A2P12110 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL6A2P12110 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.07□□□□□ -1.44
COL6A2P12110 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL6A2P12110 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.06□□□□□ -1.44
COL6A2P12110 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.06□□□□□ -1.44
COL6A2P12110 CASC19-260ENST00000641828 2001 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL6A2P12110 AL591135.1-201ENST00000401578 5914 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 AC011416.1-201ENST00000514947 1732 ntBASIC6.06□□□□□ -1.44
COL6A2P12110 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms