Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.66□□□□□ -1.5
MMP3P08254 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MMP3P08254 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MMP3P08254 MIR6839-201ENST00000620425 113 ntBASIC5.66□□□□□ -1.5
MMP3P08254 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MMP3P08254 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.66□□□□□ -1.5
MMP3P08254 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.66□□□□□ -1.5
MMP3P08254 SDAD1P1-202ENST00000524156 2051 ntBASIC5.66□□□□□ -1.5
MMP3P08254 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MMP3P08254 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
MMP3P08254 AC110792.3-201ENST00000595906 1614 ntBASIC5.66□□□□□ -1.5
MMP3P08254 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
MMP3P08254 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
MMP3P08254 ABCC13-202ENST00000463099 3842 ntBASIC5.66□□□□□ -1.5
MMP3P08254 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.66□□□□□ -1.5
MMP3P08254 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.65□□□□□ -1.5
MMP3P08254 AC016745.2-201ENST00000608834 3443 ntBASIC5.65□□□□□ -1.5
MMP3P08254 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
MMP3P08254 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
MMP3P08254 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MMP3P08254 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.65□□□□□ -1.5
MMP3P08254 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.65□□□□□ -1.5
MMP3P08254 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MMP3P08254 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
MMP3P08254 RNA5SP223-201ENST00000365174 120 ntBASIC5.65□□□□□ -1.5
MMP3P08254 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
MMP3P08254 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
MMP3P08254 GCNT6-201ENST00000379591 934 ntBASIC5.65□□□□□ -1.5
MMP3P08254 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
MMP3P08254 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
MMP3P08254 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
MMP3P08254 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.65□□□□□ -1.5
MMP3P08254 VN1R31P-201ENST00000417498 730 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AF186996.5-201ENST00000418098 904 ntBASIC5.65□□□□□ -1.5
MMP3P08254 DPPA2P2-201ENST00000418220 897 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AC019050.1-201ENST00000418508 492 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.65□□□□□ -1.5
MMP3P08254 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.65□□□□□ -1.5
MMP3P08254 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.65□□□□□ -1.5
MMP3P08254 AC138761.5-201ENST00000433967 325 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AL138878.2-201ENST00000440581 1241 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.65□□□□□ -1.5
MMP3P08254 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.65□□□□□ -1.5
MMP3P08254 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.65□□□□□ -1.5
MMP3P08254 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.65□□□□□ -1.5
MMP3P08254 AP002345.1-201ENST00000456493 928 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.65□□□□□ -1.5
MMP3P08254 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.65□□□□□ -1.5
MMP3P08254 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.65□□□□□ -1.5
MMP3P08254 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.65□□□□□ -1.5
MMP3P08254 OR4V1P-201ENST00000525394 1140 ntBASIC5.65□□□□□ -1.5
MMP3P08254 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MMP3P08254 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.65□□□□□ -1.5
MMP3P08254 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.65□□□□□ -1.5
MMP3P08254 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.65□□□□□ -1.5
MMP3P08254 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.65□□□□□ -1.5
MMP3P08254 AC126365.2-201ENST00000580630 379 ntBASIC5.65□□□□□ -1.5
MMP3P08254 MIR3667-201ENST00000581025 74 ntBASIC5.65□□□□□ -1.5
MMP3P08254 OR1AB1P-201ENST00000585564 761 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AC015911.5-201ENST00000587076 451 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AC234771.5-201ENST00000600161 514 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AC093388.1-201ENST00000609166 430 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.65□□□□□ -1.5
MMP3P08254 MIR378J-201ENST00000611988 109 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AL031658.2-201ENST00000616850 651 ntBASIC5.65□□□□□ -1.5
MMP3P08254 MIR7703-201ENST00000620784 77 ntBASIC5.65□□□□□ -1.5
MMP3P08254 AP003499.2-201ENST00000624100 483 ntBASIC5.65□□□□□ -1.5
MMP3P08254 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.65□□□□□ -1.5
MMP3P08254 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.65□□□□□ -1.5
MMP3P08254 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
MMP3P08254 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
MMP3P08254 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
MMP3P08254 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
MMP3P08254 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
MMP3P08254 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.51
MMP3P08254 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
MMP3P08254 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.65□□□□□ -1.51
MMP3P08254 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
MMP3P08254 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.65□□□□□ -1.51
MMP3P08254 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.65□□□□□ -1.51
MMP3P08254 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MMP3P08254 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
MMP3P08254 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MMP3P08254 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
MMP3P08254 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
MMP3P08254 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
MMP3P08254 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MMP3P08254 SNORA2.3-201ENST00000383920 135 ntBASIC5.64□□□□□ -1.51
MMP3P08254 SNORA70.6-201ENST00000383934 134 ntBASIC5.64□□□□□ -1.51
MMP3P08254 SNORA77-201ENST00000408716 125 ntBASIC5.64□□□□□ -1.51
MMP3P08254 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.64□□□□□ -1.51
MMP3P08254 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.64□□□□□ -1.51
MMP3P08254 RPL7AP49-201ENST00000429522 581 ntBASIC5.64□□□□□ -1.51
MMP3P08254 AL591438.1-201ENST00000433508 581 ntBASIC5.64□□□□□ -1.51
MMP3P08254 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.64□□□□□ -1.51
MMP3P08254 AC093414.1-201ENST00000434712 514 ntBASIC5.64□□□□□ -1.51
MMP3P08254 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.64□□□□□ -1.51
MMP3P08254 RPL5P25-201ENST00000441148 775 ntBASIC5.64□□□□□ -1.51
MMP3P08254 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.64□□□□□ -1.51
MMP3P08254 AC090804.1-201ENST00000448870 490 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms