Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL3A1P02461 OR9K1P-202ENST00000641111 3217 ntBASIC6.39□□□□□ -1.39
COL3A1P02461 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL3A1P02461 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL3A1P02461 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL3A1P02461 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL3A1P02461 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
COL3A1P02461 OR5T3-201ENST00000303059 1023 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.38□□□□□ -1.39
COL3A1P02461 SNORA70F-201ENST00000384142 135 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 MIR192-201ENST00000384915 110 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.38□□□□□ -1.39
COL3A1P02461 TMBIM7P-201ENST00000418074 855 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 AL354692.1-201ENST00000423044 315 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.38□□□□□ -1.39
COL3A1P02461 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.38□□□□□ -1.39
COL3A1P02461 MTND2P2-201ENST00000434633 945 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 AL772161.1-201ENST00000439130 476 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.38□□□□□ -1.39
COL3A1P02461 MTCO3P17-201ENST00000443775 513 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.38□□□□□ -1.39
COL3A1P02461 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.38□□□□□ -1.39
COL3A1P02461 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.38□□□□□ -1.39
COL3A1P02461 AC006967.1-201ENST00000467608 589 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.38□□□□□ -1.39
COL3A1P02461 AC119751.4-201ENST00000507498 357 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.38□□□□□ -1.39
COL3A1P02461 CR383656.6-201ENST00000550518 394 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 MRPS21P9-201ENST00000571150 257 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 AC008745.1-201ENST00000604064 271 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 AL121932.1-201ENST00000605542 214 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 HPVC1-201ENST00000629899 1198 ntBASIC6.38□□□□□ -1.39
COL3A1P02461 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.38□□□□□ -1.39
COL3A1P02461 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL3A1P02461 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COL3A1P02461 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL3A1P02461 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.38□□□□□ -1.39
COL3A1P02461 AP000473.2-201ENST00000602659 1537 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
COL3A1P02461 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.37□□□□□ -1.39
COL3A1P02461 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
COL3A1P02461 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 NPM1P40-201ENST00000412758 733 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 AC092570.3-201ENST00000420113 693 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 AL356806.1-201ENST00000422524 916 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.37□□□□□ -1.39
COL3A1P02461 AL645638.1-201ENST00000440519 361 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.37□□□□□ -1.39
COL3A1P02461 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.37□□□□□ -1.39
COL3A1P02461 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.37□□□□□ -1.39
COL3A1P02461 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 OR51A1P-201ENST00000511110 946 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 MTATP6P9-201ENST00000515039 680 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 Y_RNA.719-201ENST00000517156 106 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 AP006289.1-201ENST00000538089 277 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 CYCSP40-201ENST00000575927 294 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 AP000919.1-201ENST00000582850 985 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.37□□□□□ -1.39
COL3A1P02461 AC087283.1-201ENST00000604029 1074 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 AC008833.1-201ENST00000611633 691 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.37□□□□□ -1.39
COL3A1P02461 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
COL3A1P02461 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 NOL8P1-201ENST00000508336 3529 ntBASIC6.37□□□□□ -1.39
COL3A1P02461 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
COL3A1P02461 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL3A1P02461 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
COL3A1P02461 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
COL3A1P02461 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL3A1P02461 Y_RNA.110-201ENST00000363220 99 ntBASIC6.36□□□□□ -1.39
COL3A1P02461 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL3A1P02461 RNU6-925P-201ENST00000384629 104 ntBASIC6.36□□□□□ -1.39
COL3A1P02461 ATP5F1P6-201ENST00000402768 767 ntBASIC6.36□□□□□ -1.39
COL3A1P02461 ATG4AP1-201ENST00000416893 538 ntBASIC6.36□□□□□ -1.39
COL3A1P02461 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.36□□□□□ -1.39
COL3A1P02461 AC069213.2-201ENST00000420238 366 ntBASIC6.36□□□□□ -1.39
COL3A1P02461 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.36□□□□□ -1.39
COL3A1P02461 CEACAMP6-201ENST00000452007 574 ntBASIC6.36□□□□□ -1.39
COL3A1P02461 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.36□□□□□ -1.39
COL3A1P02461 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.36□□□□□ -1.39
COL3A1P02461 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
COL3A1P02461 SCARNA1-201ENST00000517138 166 ntBASIC6.36□□□□□ -1.39
COL3A1P02461 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.36□□□□□ -1.39
COL3A1P02461 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.36□□□□□ -1.39
COL3A1P02461 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.36□□□□□ -1.39
COL3A1P02461 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL3A1P02461 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.36□□□□□ -1.39
COL3A1P02461 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.36□□□□□ -1.39
COL3A1P02461 AC133555.2-201ENST00000550213 292 ntBASIC6.36□□□□□ -1.39
COL3A1P02461 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.36□□□□□ -1.39
COL3A1P02461 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms