Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 MIR448-201ENST00000362131 111 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 SNORA73.1-201ENST00000363107 205 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 RNA5SP394-201ENST00000364216 119 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 OR13C3-201ENST00000374781 1108 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 U3.35-201ENST00000408405 208 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AL160275.2-201ENST00000412010 394 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 RPL5P30-201ENST00000465511 891 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 RPL7AP10-201ENST00000481016 791 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 SNORD46.2-201ENST00000516021 102 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 SNORA43.3-201ENST00000517240 103 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 MRPS16P1-201ENST00000523462 412 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC005000.1-201ENST00000536192 288 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 YWHABP2-201ENST00000540201 713 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AL358913.1-201ENST00000554342 121 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 EIF1AXP2-201ENST00000555940 413 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC084759.1-201ENST00000561168 290 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 MRPS21P7-201ENST00000566937 238 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 SLC25A36P1-201ENST00000590111 465 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC012616.1-201ENST00000600294 197 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 COX6CP4-201ENST00000605798 228 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AL008729.2-201ENST00000606393 473 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC015982.1-201ENST00000608113 465 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC073575.2-201ENST00000614212 627 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AL391597.1-201ENST00000618707 694 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AF117829.2-201ENST00000619538 361 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC008691.1-209ENST00000642094 814 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 Z98755.1-201ENST00000407015 1384 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 AC007342.9-201ENST00000623877 1385 ntBASIC3.74□□□□□ -1.81
HLA-DQA1P01909 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DQA1P01909 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 SDHDP6-201ENST00000414693 480 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 ARAFP1-201ENST00000422172 605 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC093414.1-201ENST00000434712 514 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 LRRC37A14P-201ENST00000452297 462 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 OR52E7P-201ENST00000452394 933 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 YWHAEP1-201ENST00000453697 763 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AP000547.1-201ENST00000454360 617 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC007386.1-201ENST00000455212 582 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC084754.1-201ENST00000463466 464 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC010469.1-201ENST00000463864 576 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 RPS26P28-201ENST00000470806 348 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC007998.1-201ENST00000474156 672 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC108022.1-201ENST00000493466 478 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC124856.1-201ENST00000600819 896 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 HCG18-243ENST00000602498 327 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AC108865.2-201ENST00000606881 432 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AP005432.2-201ENST00000608162 586 ntBASIC3.73□□□□□ -1.81
HLA-DQA1P01909 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DQA1P01909 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms