Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TNFP01375 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNFP01375 AC005261.6-201ENST00000623072 1387 ntBASIC4.74□□□□□ -1.65
TNFP01375 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNFP01375 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TNFP01375 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TNFP01375 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TNFP01375 RBPJP2-201ENST00000618187 1444 ntBASIC4.73□□□□□ -1.65
TNFP01375 AP001157.1-201ENST00000550837 2339 ntBASIC4.73□□□□□ -1.65
TNFP01375 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TNFP01375 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.73□□□□□ -1.65
TNFP01375 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFP01375 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TNFP01375 RNA5SP505-201ENST00000364748 108 ntBASIC4.73□□□□□ -1.65
TNFP01375 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFP01375 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TNFP01375 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.73□□□□□ -1.65
TNFP01375 AC092570.3-201ENST00000420113 693 ntBASIC4.73□□□□□ -1.65
TNFP01375 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TNFP01375 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.73□□□□□ -1.65
TNFP01375 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.73□□□□□ -1.65
TNFP01375 RPS17P8-201ENST00000434525 335 ntBASIC4.73□□□□□ -1.65
TNFP01375 RPL36AP15-201ENST00000444514 266 ntBASIC4.73□□□□□ -1.65
TNFP01375 AC073073.1-201ENST00000493920 463 ntBASIC4.73□□□□□ -1.65
TNFP01375 RN7SL558P-201ENST00000497468 299 ntBASIC4.73□□□□□ -1.65
TNFP01375 SCARNA22-201ENST00000503991 125 ntBASIC4.73□□□□□ -1.65
TNFP01375 AC093720.1-201ENST00000505681 714 ntBASIC4.73□□□□□ -1.65
TNFP01375 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.73□□□□□ -1.65
TNFP01375 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.73□□□□□ -1.65
TNFP01375 AC105031.1-201ENST00000518550 476 ntBASIC4.73□□□□□ -1.65
TNFP01375 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.73□□□□□ -1.65
TNFP01375 AC026688.1-201ENST00000520639 1168 ntBASIC4.73□□□□□ -1.65
TNFP01375 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TNFP01375 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
TNFP01375 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.73□□□□□ -1.65
TNFP01375 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.73□□□□□ -1.65
TNFP01375 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.73□□□□□ -1.65
TNFP01375 AL353684.1-201ENST00000622677 1120 ntBASIC4.73□□□□□ -1.65
TNFP01375 AC021106.3-201ENST00000623925 531 ntBASIC4.73□□□□□ -1.65
TNFP01375 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TNFP01375 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFP01375 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFP01375 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFP01375 AP001284.1-201ENST00000528393 2118 ntBASIC4.73□□□□□ -1.65
TNFP01375 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFP01375 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.73□□□□□ -1.65
TNFP01375 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFP01375 AC007382.1-201ENST00000624376 2618 ntBASIC4.73□□□□□ -1.65
TNFP01375 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TNFP01375 SMG1P6-201ENST00000532337 2930 ntBASIC4.73□□□□□ -1.65
TNFP01375 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFP01375 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFP01375 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFP01375 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TNFP01375 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
TNFP01375 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TNFP01375 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 AC010266.2-201ENST00000564741 3255 ntBASIC4.72□□□□□ -1.65
TNFP01375 AC010300.1-201ENST00000600671 5134 ntBASIC4.72□□□□□ -1.65
TNFP01375 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TNFP01375 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 AL590240.1-201ENST00000334118 313 ntBASIC4.72□□□□□ -1.65
TNFP01375 RN7SKP106-201ENST00000410832 272 ntBASIC4.72□□□□□ -1.65
TNFP01375 AC016397.1-201ENST00000412463 242 ntBASIC4.72□□□□□ -1.65
TNFP01375 LINC00993-201ENST00000420453 540 ntBASIC4.72□□□□□ -1.65
TNFP01375 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 DNAJC19P7-201ENST00000428811 344 ntBASIC4.72□□□□□ -1.65
TNFP01375 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 AC068287.1-201ENST00000430283 295 ntBASIC4.72□□□□□ -1.65
TNFP01375 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 AL451139.1-201ENST00000434718 346 ntBASIC4.72□□□□□ -1.65
TNFP01375 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TNFP01375 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.72□□□□□ -1.65
TNFP01375 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.72□□□□□ -1.65
TNFP01375 RN7SL354P-201ENST00000469282 294 ntBASIC4.72□□□□□ -1.65
TNFP01375 RN7SL481P-201ENST00000477764 299 ntBASIC4.72□□□□□ -1.65
TNFP01375 RN7SL459P-201ENST00000481078 302 ntBASIC4.72□□□□□ -1.65
TNFP01375 CEACAMP10-202ENST00000495431 496 ntBASIC4.72□□□□□ -1.65
TNFP01375 ASNSP4-201ENST00000511103 447 ntBASIC4.72□□□□□ -1.65
TNFP01375 RNU6-709P-201ENST00000517257 104 ntBASIC4.72□□□□□ -1.65
TNFP01375 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.72□□□□□ -1.65
TNFP01375 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TNFP01375 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.72□□□□□ -1.65
TNFP01375 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.72□□□□□ -1.65
TNFP01375 AC090286.3-201ENST00000573133 187 ntBASIC4.72□□□□□ -1.65
TNFP01375 AC027216.1-201ENST00000577726 685 ntBASIC4.72□□□□□ -1.65
TNFP01375 RN7SL802P-201ENST00000577858 299 ntBASIC4.72□□□□□ -1.65
TNFP01375 MIR5699-201ENST00000578903 90 ntBASIC4.72□□□□□ -1.65
TNFP01375 AP000648.2-201ENST00000624182 404 ntBASIC4.72□□□□□ -1.65
TNFP01375 FRG1EP-201ENST00000634469 770 ntBASIC4.72□□□□□ -1.65
TNFP01375 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.72□□□□□ -1.65
TNFP01375 TCP11X1-202ENST00000622971 1372 ntBASIC4.72□□□□□ -1.65
TNFP01375 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TNFP01375 AC025574.1-201ENST00000554784 1653 ntBASIC4.72□□□□□ -1.65
TNFP01375 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.72□□□□□ -1.65
TNFP01375 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms