Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
TIMP1P01033 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.3□□□□□ -1.56
TIMP1P01033 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.3□□□□□ -1.56
TIMP1P01033 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TIMP1P01033 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TIMP1P01033 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TIMP1P01033 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TIMP1P01033 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.29□□□□□ -1.56
TIMP1P01033 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TIMP1P01033 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TIMP1P01033 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.29□□□□□ -1.56
TIMP1P01033 AL731566.1-201ENST00000620490 1937 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
TIMP1P01033 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TIMP1P01033 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.29□□□□□ -1.56
TIMP1P01033 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TIMP1P01033 OR6C69P-201ENST00000394268 893 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.29□□□□□ -1.56
TIMP1P01033 LRRC37BP1-201ENST00000398851 714 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.29□□□□□ -1.56
TIMP1P01033 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.29□□□□□ -1.56
TIMP1P01033 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.29□□□□□ -1.56
TIMP1P01033 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.29□□□□□ -1.56
TIMP1P01033 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.29□□□□□ -1.56
TIMP1P01033 AC000111.2-201ENST00000448200 210 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 TAAR4P-201ENST00000454843 1039 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 USP9YP2-201ENST00000504503 1000 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.29□□□□□ -1.56
TIMP1P01033 USP9YP1-201ENST00000513521 1002 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.29□□□□□ -1.56
TIMP1P01033 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TIMP1P01033 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TIMP1P01033 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.29□□□□□ -1.56
TIMP1P01033 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.29□□□□□ -1.56
TIMP1P01033 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.29□□□□□ -1.56
TIMP1P01033 MIR4433B-201ENST00000581329 102 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 AC093227.2-201ENST00000589357 285 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 VN1R85P-201ENST00000601587 426 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 AC073091.2-201ENST00000603205 907 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.29□□□□□ -1.56
TIMP1P01033 AL049536.1-201ENST00000625043 744 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TIMP1P01033 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
TIMP1P01033 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TIMP1P01033 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.29□□□□□ -1.56
TIMP1P01033 AC104118.1-201ENST00000607625 1589 ntBASIC5.29□□□□□ -1.56
TIMP1P01033 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TIMP1P01033 AC007382.1-201ENST00000624376 2618 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TIMP1P01033 AC004076.2-201ENST00000620532 3323 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.28□□□□□ -1.56
TIMP1P01033 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TIMP1P01033 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.28□□□□□ -1.56
TIMP1P01033 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TIMP1P01033 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.28□□□□□ -1.56
TIMP1P01033 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TIMP1P01033 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TIMP1P01033 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TIMP1P01033 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.28□□□□□ -1.56
TIMP1P01033 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
TIMP1P01033 AC002525.1-201ENST00000624392 1622 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 TRAV35-201ENST00000390462 330 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.28□□□□□ -1.56
TIMP1P01033 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.28□□□□□ -1.56
TIMP1P01033 AL158073.1-201ENST00000426848 1104 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.28□□□□□ -1.56
TIMP1P01033 SCAND3P1-201ENST00000439854 1060 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 AC090804.1-201ENST00000448870 490 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 RPL7P32-201ENST00000457119 744 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.28□□□□□ -1.56
TIMP1P01033 AC005412.2-201ENST00000492004 341 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 IMPA1P1-201ENST00000510718 842 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.28□□□□□ -1.56
TIMP1P01033 RN7SL802P-201ENST00000577858 299 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 AC016252.1-201ENST00000609721 474 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 AC108359.1-201ENST00000616451 1211 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.28□□□□□ -1.56
TIMP1P01033 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.28□□□□□ -1.56
TIMP1P01033 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.28□□□□□ -1.56
TIMP1P01033 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TIMP1P01033 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TIMP1P01033 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.28□□□□□ -1.56
TIMP1P01033 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TIMP1P01033 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TIMP1P01033 ASNSP1-204ENST00000641977 1664 ntBASIC5.28□□□□□ -1.56
TIMP1P01033 AP002512.4-202ENST00000641599 4530 ntBASIC5.27□□□□□ -1.57
TIMP1P01033 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TIMP1P01033 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.27□□□□□ -1.57
TIMP1P01033 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.27□□□□□ -1.57
TIMP1P01033 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
TIMP1P01033 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TIMP1P01033 RNU1-64P-201ENST00000365443 163 ntBASIC5.27□□□□□ -1.57
TIMP1P01033 MIR134-201ENST00000385258 73 ntBASIC5.27□□□□□ -1.57
TIMP1P01033 SNORA48.4-201ENST00000391089 134 ntBASIC5.27□□□□□ -1.57
TIMP1P01033 AL035079.1-201ENST00000405210 287 ntBASIC5.27□□□□□ -1.57
TIMP1P01033 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.27□□□□□ -1.57
TIMP1P01033 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.27□□□□□ -1.57
TIMP1P01033 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.27□□□□□ -1.57
TIMP1P01033 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms