Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AL589674.2-201ENST00000604304 337 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 AC009027.1-201ENST00000604510 479 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NKX2-2O95096 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-2O95096 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-2O95096 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-2O95096 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-2O95096 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-2O95096 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-2O95096 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NKX2-2O95096 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-2O95096 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-2O95096 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AL645568.2-201ENST00000432815 1337 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 GTF2H2B-203ENST00000508065 1432 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.97□□□□□ -1.61
NKX2-2O95096 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NKX2-2O95096 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-2O95096 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AL132640.2-201ENST00000559968 1698 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NKX2-2O95096 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NKX2-2O95096 RNA5SP487-201ENST00000410186 122 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-2O95096 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC073310.1-201ENST00000423226 1033 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AC115285.1-201ENST00000424879 736 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 DEFB130D-201ENST00000426866 237 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AL136231.1-201ENST00000429407 730 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AC124944.2-201ENST00000429866 1242 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 RPL12P11-201ENST00000439970 501 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AL353093.1-201ENST00000441292 436 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 RPL7P51-201ENST00000490532 749 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 RPS12P31-201ENST00000491419 398 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AC010374.1-201ENST00000503762 1237 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC108471.1-201ENST00000513977 287 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 OR5AK3P-201ENST00000527486 1297 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AC027026.1-201ENST00000532323 742 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.97□□□□□ -1.61
NKX2-2O95096 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.97□□□□□ -1.61
NKX2-2O95096 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC245884.10-201ENST00000597355 337 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.97□□□□□ -1.61
NKX2-2O95096 SUGT1P3-202ENST00000604259 383 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-2O95096 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC124016.2-201ENST00000610058 665 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC006840.1-201ENST00000623069 542 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AC126544.2-201ENST00000625174 749 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.97□□□□□ -1.61
NKX2-2O95096 AC006927.2-201ENST00000639256 389 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NKX2-2O95096 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 AL353796.1-201ENST00000561542 3241 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 AL078621.3-201ENST00000623707 2042 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 AP000432.2-201ENST00000624164 2048 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.97□□□□□ -1.61
NKX2-2O95096 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 HSPD1P14-201ENST00000432666 1618 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NKX2-2O95096 VN2R3P-201ENST00000422626 1412 ntBASIC4.97□□□□□ -1.61
NKX2-2O95096 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
NKX2-2O95096 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
NKX2-2O95096 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.96□□□□□ -1.61
NKX2-2O95096 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
NKX2-2O95096 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
NKX2-2O95096 AP001029.2-203ENST00000589795 4910 ntBASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms