Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC126177.5-201ENST00000549599 178 ntBASIC5.27□□□□□ -1.57
GPC4O75487 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.27□□□□□ -1.57
GPC4O75487 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GPC4O75487 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.27□□□□□ -1.57
GPC4O75487 MTCYBP13-201ENST00000578634 1093 ntBASIC5.27□□□□□ -1.57
GPC4O75487 PRPF19P1-201ENST00000584766 898 ntBASIC5.27□□□□□ -1.57
GPC4O75487 BNIP3P19-201ENST00000605397 577 ntBASIC5.27□□□□□ -1.57
GPC4O75487 AL135786.2-201ENST00000608422 615 ntBASIC5.27□□□□□ -1.57
GPC4O75487 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GPC4O75487 AL356274.1-201ENST00000617064 410 ntBASIC5.27□□□□□ -1.57
GPC4O75487 AC097460.3-201ENST00000623099 442 ntBASIC5.27□□□□□ -1.57
GPC4O75487 MIR4302-201ENST00000638058 60 ntBASIC5.27□□□□□ -1.57
GPC4O75487 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
GPC4O75487 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC4O75487 AC073136.1-201ENST00000449426 2884 ntBASIC5.27□□□□□ -1.57
GPC4O75487 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
GPC4O75487 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC4O75487 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
GPC4O75487 TRIM51GP-201ENST00000534741 1350 ntBASIC5.27□□□□□ -1.57
GPC4O75487 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GPC4O75487 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.26□□□□□ -1.57
GPC4O75487 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.26□□□□□ -1.57
GPC4O75487 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
GPC4O75487 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GPC4O75487 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
GPC4O75487 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GPC4O75487 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
GPC4O75487 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 RNA5SP183-201ENST00000362452 119 ntBASIC5.26□□□□□ -1.57
GPC4O75487 RN7SKP160-201ENST00000363804 340 ntBASIC5.26□□□□□ -1.57
GPC4O75487 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GPC4O75487 RNA5SP339-201ENST00000390987 122 ntBASIC5.26□□□□□ -1.57
GPC4O75487 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GPC4O75487 OR4K12P-201ENST00000406538 961 ntBASIC5.26□□□□□ -1.57
GPC4O75487 RNA5SP487-201ENST00000410186 122 ntBASIC5.26□□□□□ -1.57
GPC4O75487 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.26□□□□□ -1.57
GPC4O75487 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.26□□□□□ -1.57
GPC4O75487 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.26□□□□□ -1.57
GPC4O75487 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.26□□□□□ -1.57
GPC4O75487 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.26□□□□□ -1.57
GPC4O75487 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.26□□□□□ -1.57
GPC4O75487 AL157827.1-201ENST00000447622 132 ntBASIC5.26□□□□□ -1.57
GPC4O75487 AC058823.1-201ENST00000485315 474 ntBASIC5.26□□□□□ -1.57
GPC4O75487 RPS12P31-201ENST00000491419 398 ntBASIC5.26□□□□□ -1.57
GPC4O75487 RPEP1-201ENST00000504507 658 ntBASIC5.26□□□□□ -1.57
GPC4O75487 MTND3P3-201ENST00000505004 126 ntBASIC5.26□□□□□ -1.57
GPC4O75487 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.26□□□□□ -1.57
GPC4O75487 IMPA1P1-201ENST00000510718 842 ntBASIC5.26□□□□□ -1.57
GPC4O75487 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.26□□□□□ -1.57
GPC4O75487 YWHABP2-201ENST00000540201 713 ntBASIC5.26□□□□□ -1.57
GPC4O75487 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GPC4O75487 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.26□□□□□ -1.57
GPC4O75487 RBM22P1-201ENST00000578589 1214 ntBASIC5.26□□□□□ -1.57
GPC4O75487 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 AC015849.2-201ENST00000605738 409 ntBASIC5.26□□□□□ -1.57
GPC4O75487 AC079395.2-201ENST00000610982 737 ntBASIC5.26□□□□□ -1.57
GPC4O75487 AL163051.2-201ENST00000618976 735 ntBASIC5.26□□□□□ -1.57
GPC4O75487 AC005840.5-201ENST00000619166 599 ntBASIC5.26□□□□□ -1.57
GPC4O75487 AC095038.2-201ENST00000621464 1070 ntBASIC5.26□□□□□ -1.57
GPC4O75487 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.26□□□□□ -1.57
GPC4O75487 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GPC4O75487 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GPC4O75487 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC4O75487 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GPC4O75487 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GPC4O75487 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
GPC4O75487 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.25□□□□□ -1.57
GPC4O75487 AC107021.2-201ENST00000567714 2095 ntBASIC5.25□□□□□ -1.57
GPC4O75487 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GPC4O75487 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC4O75487 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC4O75487 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.25□□□□□ -1.57
GPC4O75487 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GPC4O75487 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC4O75487 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.25□□□□□ -1.57
GPC4O75487 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
GPC4O75487 RNU1-77P-201ENST00000390868 162 ntBASIC5.25□□□□□ -1.57
GPC4O75487 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.25□□□□□ -1.57
GPC4O75487 NPM1P40-201ENST00000412758 733 ntBASIC5.25□□□□□ -1.57
GPC4O75487 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
GPC4O75487 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.25□□□□□ -1.57
GPC4O75487 OR13Z1P-201ENST00000416141 834 ntBASIC5.25□□□□□ -1.57
GPC4O75487 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.25□□□□□ -1.57
GPC4O75487 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GPC4O75487 SCAND3P1-201ENST00000439854 1060 ntBASIC5.25□□□□□ -1.57
GPC4O75487 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.25□□□□□ -1.57
GPC4O75487 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.25□□□□□ -1.57
GPC4O75487 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.25□□□□□ -1.57
GPC4O75487 RPS26P41-201ENST00000450370 284 ntBASIC5.25□□□□□ -1.57
GPC4O75487 PRPF38AP1-201ENST00000451976 933 ntBASIC5.25□□□□□ -1.57
GPC4O75487 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms