Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HCN1O60741 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HCN1O60741 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.78□□□□□ -1.64
HCN1O60741 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HCN1O60741 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCN1O60741 AC098592.2-201ENST00000413158 265 ntBASIC4.78□□□□□ -1.64
HCN1O60741 OR13Z1P-201ENST00000416141 834 ntBASIC4.78□□□□□ -1.64
HCN1O60741 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.78□□□□□ -1.64
HCN1O60741 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.78□□□□□ -1.64
HCN1O60741 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HCN1O60741 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.78□□□□□ -1.64
HCN1O60741 BX842559.2-201ENST00000451418 605 ntBASIC4.78□□□□□ -1.64
HCN1O60741 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.78□□□□□ -1.64
HCN1O60741 RN7SL97P-201ENST00000486780 299 ntBASIC4.78□□□□□ -1.64
HCN1O60741 RN7SKP66-201ENST00000516681 231 ntBASIC4.78□□□□□ -1.64
HCN1O60741 AC012400.1-201ENST00000518452 381 ntBASIC4.78□□□□□ -1.64
HCN1O60741 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.78□□□□□ -1.64
HCN1O60741 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.78□□□□□ -1.64
HCN1O60741 OR4A46P-201ENST00000527255 933 ntBASIC4.78□□□□□ -1.64
HCN1O60741 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.78□□□□□ -1.64
HCN1O60741 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.78□□□□□ -1.64
HCN1O60741 CD24P2-201ENST00000565486 219 ntBASIC4.78□□□□□ -1.64
HCN1O60741 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.78□□□□□ -1.64
HCN1O60741 AP000919.1-201ENST00000582850 985 ntBASIC4.78□□□□□ -1.64
HCN1O60741 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.78□□□□□ -1.64
HCN1O60741 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.78□□□□□ -1.64
HCN1O60741 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.78□□□□□ -1.64
HCN1O60741 AC015914.2-201ENST00000618167 288 ntBASIC4.78□□□□□ -1.64
HCN1O60741 AC243960.7-201ENST00000623532 707 ntBASIC4.78□□□□□ -1.64
HCN1O60741 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HCN1O60741 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCN1O60741 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HCN1O60741 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCN1O60741 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.78□□□□□ -1.64
HCN1O60741 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HCN1O60741 AC092747.4-201ENST00000620519 1861 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AC083843.3-201ENST00000623679 2186 ntBASIC4.77□□□□□ -1.65
HCN1O60741 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HCN1O60741 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.77□□□□□ -1.65
HCN1O60741 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HCN1O60741 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HCN1O60741 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HCN1O60741 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.77□□□□□ -1.65
HCN1O60741 AL645733.1-201ENST00000402250 217 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AL133270.1-201ENST00000402635 279 ntBASIC4.77□□□□□ -1.65
HCN1O60741 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HCN1O60741 RN7SKP126-201ENST00000411143 300 ntBASIC4.77□□□□□ -1.65
HCN1O60741 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.77□□□□□ -1.65
HCN1O60741 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.77□□□□□ -1.65
HCN1O60741 RPL12P43-201ENST00000420608 499 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.77□□□□□ -1.65
HCN1O60741 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.77□□□□□ -1.65
HCN1O60741 CLUHP1-201ENST00000435012 1190 ntBASIC4.77□□□□□ -1.65
HCN1O60741 VN1R54P-201ENST00000435210 1049 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.77□□□□□ -1.65
HCN1O60741 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.77□□□□□ -1.65
HCN1O60741 NPM1P33-201ENST00000438918 872 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AL031584.1-201ENST00000447169 754 ntBASIC4.77□□□□□ -1.65
HCN1O60741 RPL7L1P1-201ENST00000448259 785 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.77□□□□□ -1.65
HCN1O60741 AC104634.1-201ENST00000452720 462 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AL645937.3-201ENST00000453647 936 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.77□□□□□ -1.65
HCN1O60741 OR7L1P-201ENST00000456181 380 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.77□□□□□ -1.65
HCN1O60741 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.77□□□□□ -1.65
HCN1O60741 HMGB3P16-201ENST00000508037 287 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AC006427.1-201ENST00000514359 712 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AC008676.3-201ENST00000521237 435 ntBASIC4.77□□□□□ -1.65
HCN1O60741 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.77□□□□□ -1.65
HCN1O60741 AP000676.2-201ENST00000529711 301 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AC092490.3-201ENST00000545370 572 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.77□□□□□ -1.65
HCN1O60741 MIR4646-201ENST00000580775 63 ntBASIC4.77□□□□□ -1.65
HCN1O60741 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.77□□□□□ -1.65
HCN1O60741 AL135786.2-201ENST00000608422 615 ntBASIC4.77□□□□□ -1.65
HCN1O60741 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.77□□□□□ -1.65
HCN1O60741 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.77□□□□□ -1.65
HCN1O60741 AC135068.12-201ENST00000637370 931 ntBASIC4.77□□□□□ -1.65
HCN1O60741 LINC01739-205ENST00000641890 573 ntBASIC4.77□□□□□ -1.65
HCN1O60741 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HCN1O60741 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HCN1O60741 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.77□□□□□ -1.65
HCN1O60741 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HCN1O60741 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HCN1O60741 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.77□□□□□ -1.65
HCN1O60741 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.77□□□□□ -1.65
HCN1O60741 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HCN1O60741 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HCN1O60741 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.77□□□□□ -1.65
HCN1O60741 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HCN1O60741 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.76□□□□□ -1.65
HCN1O60741 THAP12P8-201ENST00000447914 2115 ntBASIC4.76□□□□□ -1.65
HCN1O60741 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.76□□□□□ -1.65
HCN1O60741 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HCN1O60741 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HCN1O60741 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.76□□□□□ -1.65
HCN1O60741 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HCN1O60741 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.76□□□□□ -1.65
HCN1O60741 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms