Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.83□□□□□ -1.8
SSSCA1O60232 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.83□□□□□ -1.8
SSSCA1O60232 AL137845.2-201ENST00000444292 988 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.83□□□□□ -1.8
SSSCA1O60232 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.83□□□□□ -1.8
SSSCA1O60232 RNA5SP43-201ENST00000516559 110 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 RNA5SP392-201ENST00000516905 112 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 OR4A46P-201ENST00000527255 933 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 OR7E128P-201ENST00000532736 1024 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.83□□□□□ -1.8
SSSCA1O60232 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SSSCA1O60232 AC022404.1-201ENST00000555320 273 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 AC135626.1-201ENST00000556983 435 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.83□□□□□ -1.8
SSSCA1O60232 RPL26P30-202ENST00000602923 645 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 AL121932.1-201ENST00000605542 214 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 AC010424.2-201ENST00000607594 443 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.83□□□□□ -1.8
SSSCA1O60232 SNX18P1Y-201ENST00000616231 511 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.83□□□□□ -1.8
SSSCA1O60232 AL669942.2-201ENST00000620352 697 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 AL353662.3-201ENST00000625131 237 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
SSSCA1O60232 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 RNF19BPY-201ENST00000458209 1550 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 AC007382.1-201ENST00000624376 2618 ntBASIC3.83□□□□□ -1.8
SSSCA1O60232 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSSCA1O60232 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.82□□□□□ -1.8
SSSCA1O60232 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSSCA1O60232 TLK1P1-201ENST00000456760 2440 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.82□□□□□ -1.8
SSSCA1O60232 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSSCA1O60232 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SSSCA1O60232 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.82□□□□□ -1.8
SSSCA1O60232 NXF4-202ENST00000416098 1465 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSSCA1O60232 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSSCA1O60232 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SSSCA1O60232 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SSSCA1O60232 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.82□□□□□ -1.8
SSSCA1O60232 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SSSCA1O60232 AL589647.1-201ENST00000402485 466 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.82□□□□□ -1.8
SSSCA1O60232 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.82□□□□□ -1.8
SSSCA1O60232 OR2X1P-201ENST00000421144 687 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 RPL34P20-201ENST00000442771 351 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.82□□□□□ -1.8
SSSCA1O60232 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSSCA1O60232 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC3.82□□□□□ -1.8
SSSCA1O60232 HMGN2P25-201ENST00000486956 268 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 RN7SL214P-201ENST00000487317 265 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SSSCA1O60232 RN7SL244P-201ENST00000493405 297 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.82□□□□□ -1.8
SSSCA1O60232 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.82□□□□□ -1.8
SSSCA1O60232 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC3.82□□□□□ -1.8
SSSCA1O60232 AC100770.1-201ENST00000532310 322 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.82□□□□□ -1.8
SSSCA1O60232 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSSCA1O60232 AL121834.1-201ENST00000572284 509 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.82□□□□□ -1.8
SSSCA1O60232 AC095055.1-201ENST00000603472 1113 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 AC008966.2-201ENST00000606157 453 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 AL591926.8-201ENST00000616876 211 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 AC074140.1-201ENST00000621617 208 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 AC099494.2-201ENST00000623371 978 ntBASIC3.82□□□□□ -1.8
SSSCA1O60232 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SSSCA1O60232 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSSCA1O60232 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SSSCA1O60232 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.82□□□□□ -1.8
SSSCA1O60232 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.82□□□□□ -1.8
SSSCA1O60232 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.82□□□□□ -1.8
SSSCA1O60232 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSSCA1O60232 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSSCA1O60232 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSSCA1O60232 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.81□□□□□ -1.8
SSSCA1O60232 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SSSCA1O60232 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SSSCA1O60232 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.81□□□□□ -1.8
SSSCA1O60232 RNU1-108P-201ENST00000362556 161 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSSCA1O60232 DUTP5-201ENST00000406790 469 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
SSSCA1O60232 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.81□□□□□ -1.8
SSSCA1O60232 RPL23AP19-201ENST00000436229 369 ntBASIC3.81□□□□□ -1.8
SSSCA1O60232 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms