Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LDB2O43679 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LDB2O43679 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.27□□□□□ -1.57
LDB2O43679 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDB2O43679 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.27□□□□□ -1.57
LDB2O43679 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.27□□□□□ -1.57
LDB2O43679 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.26□□□□□ -1.57
LDB2O43679 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.26□□□□□ -1.57
LDB2O43679 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 C4BPAP1-201ENST00000415474 1893 ntBASIC5.26□□□□□ -1.57
LDB2O43679 AC092747.4-201ENST00000620519 1861 ntBASIC5.26□□□□□ -1.57
LDB2O43679 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.26□□□□□ -1.57
LDB2O43679 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
LDB2O43679 NPM1P37-201ENST00000403105 874 ntBASIC5.26□□□□□ -1.57
LDB2O43679 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.26□□□□□ -1.57
LDB2O43679 VN1R51P-201ENST00000411675 945 ntBASIC5.26□□□□□ -1.57
LDB2O43679 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.26□□□□□ -1.57
LDB2O43679 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.26□□□□□ -1.57
LDB2O43679 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.26□□□□□ -1.57
LDB2O43679 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.26□□□□□ -1.57
LDB2O43679 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.26□□□□□ -1.57
LDB2O43679 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 PRPF38AP1-201ENST00000451976 933 ntBASIC5.26□□□□□ -1.57
LDB2O43679 RPS3AP53-201ENST00000454716 778 ntBASIC5.26□□□□□ -1.57
LDB2O43679 RN7SL799P-201ENST00000475891 298 ntBASIC5.26□□□□□ -1.57
LDB2O43679 RPS4XP1-201ENST00000482189 787 ntBASIC5.26□□□□□ -1.57
LDB2O43679 UBE2V1P12-201ENST00000503954 474 ntBASIC5.26□□□□□ -1.57
LDB2O43679 AC121161.1-201ENST00000510606 652 ntBASIC5.26□□□□□ -1.57
LDB2O43679 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.26□□□□□ -1.57
LDB2O43679 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.26□□□□□ -1.57
LDB2O43679 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.26□□□□□ -1.57
LDB2O43679 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.26□□□□□ -1.57
LDB2O43679 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.26□□□□□ -1.57
LDB2O43679 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.26□□□□□ -1.57
LDB2O43679 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.26□□□□□ -1.57
LDB2O43679 AC040958.1-201ENST00000561102 201 ntBASIC5.26□□□□□ -1.57
LDB2O43679 AC016839.1-201ENST00000578162 867 ntBASIC5.26□□□□□ -1.57
LDB2O43679 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.26□□□□□ -1.57
LDB2O43679 RN7SL708P-201ENST00000580952 299 ntBASIC5.26□□□□□ -1.57
LDB2O43679 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.26□□□□□ -1.57
LDB2O43679 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.26□□□□□ -1.57
LDB2O43679 AC069307.1-201ENST00000602820 447 ntBASIC5.26□□□□□ -1.57
LDB2O43679 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.26□□□□□ -1.57
LDB2O43679 IMMP1LP3-201ENST00000604197 224 ntBASIC5.26□□□□□ -1.57
LDB2O43679 AC091932.2-201ENST00000623014 291 ntBASIC5.26□□□□□ -1.57
LDB2O43679 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.26□□□□□ -1.57
LDB2O43679 AC019080.5-201ENST00000624891 757 ntBASIC5.26□□□□□ -1.57
LDB2O43679 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.26□□□□□ -1.57
LDB2O43679 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.26□□□□□ -1.57
LDB2O43679 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.26□□□□□ -1.57
LDB2O43679 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
LDB2O43679 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LDB2O43679 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LDB2O43679 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LDB2O43679 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.25□□□□□ -1.57
LDB2O43679 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDB2O43679 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.25□□□□□ -1.57
LDB2O43679 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDB2O43679 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.25□□□□□ -1.57
LDB2O43679 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDB2O43679 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDB2O43679 GVINP1-202ENST00000531871 7271 ntBASIC5.25□□□□□ -1.57
LDB2O43679 RAD1P1-201ENST00000231383 813 ntBASIC5.25□□□□□ -1.57
LDB2O43679 U3.2-201ENST00000362981 210 ntBASIC5.25□□□□□ -1.57
LDB2O43679 U3.3-201ENST00000362986 216 ntBASIC5.25□□□□□ -1.57
LDB2O43679 SNORA74A-201ENST00000364089 198 ntBASIC5.25□□□□□ -1.57
LDB2O43679 RNU6-1251P-201ENST00000364502 107 ntBASIC5.25□□□□□ -1.57
LDB2O43679 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LDB2O43679 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.25□□□□□ -1.57
LDB2O43679 MIR105-2-201ENST00000385083 81 ntBASIC5.25□□□□□ -1.57
LDB2O43679 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.25□□□□□ -1.57
LDB2O43679 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDB2O43679 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDB2O43679 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.25□□□□□ -1.57
LDB2O43679 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.25□□□□□ -1.57
LDB2O43679 AC093655.2-201ENST00000425735 631 ntBASIC5.25□□□□□ -1.57
LDB2O43679 AC013262.1-201ENST00000426710 252 ntBASIC5.25□□□□□ -1.57
LDB2O43679 AC046176.1-201ENST00000435260 1170 ntBASIC5.25□□□□□ -1.57
LDB2O43679 AL627308.1-201ENST00000435693 821 ntBASIC5.25□□□□□ -1.57
LDB2O43679 RNFT1P2-201ENST00000443064 757 ntBASIC5.25□□□□□ -1.57
LDB2O43679 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.25□□□□□ -1.57
LDB2O43679 AL157884.3-201ENST00000448273 1184 ntBASIC5.25□□□□□ -1.57
LDB2O43679 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.25□□□□□ -1.57
LDB2O43679 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.25□□□□□ -1.57
LDB2O43679 RN7SL515P-201ENST00000463999 297 ntBASIC5.25□□□□□ -1.57
LDB2O43679 RN7SL189P-201ENST00000468631 289 ntBASIC5.25□□□□□ -1.57
LDB2O43679 AC012123.2-201ENST00000485809 248 ntBASIC5.25□□□□□ -1.57
LDB2O43679 OR5M14P-201ENST00000506803 618 ntBASIC5.25□□□□□ -1.57
LDB2O43679 RNA5SP92-201ENST00000516437 110 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms