Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1AO00322 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1AO00322 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.58□□□□□ -1.68
UPK1AO00322 RN7SL177P-201ENST00000476596 299 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 RPL23AP37-201ENST00000479658 549 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 RN7SL817P-201ENST00000480777 288 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 RPSAP50-201ENST00000481955 852 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 AC090142.2-201ENST00000483263 416 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1AO00322 AC140172.1-201ENST00000502928 141 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 RNA5SP392-201ENST00000516905 112 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 Y_RNA.719-201ENST00000517156 106 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1AO00322 AC079075.1-201ENST00000559543 878 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 AC087477.6-201ENST00000559595 843 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.58□□□□□ -1.68
UPK1AO00322 AP000894.4-201ENST00000610185 483 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1AO00322 AC015804.1-201ENST00000622935 435 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 AC243960.7-201ENST00000623532 707 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 AP002799.1-201ENST00000623552 423 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 AL353662.3-201ENST00000625131 237 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.58□□□□□ -1.68
UPK1AO00322 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.58□□□□□ -1.68
UPK1AO00322 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1AO00322 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
UPK1AO00322 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.58□□□□□ -1.68
UPK1AO00322 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1AO00322 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
UPK1AO00322 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
UPK1AO00322 AC008758.3-201ENST00000507003 1829 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 ICE2P1-201ENST00000512800 1849 ntBASIC4.58□□□□□ -1.68
UPK1AO00322 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPK1AO00322 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1AO00322 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1AO00322 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.57□□□□□ -1.68
UPK1AO00322 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1AO00322 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.57□□□□□ -1.68
UPK1AO00322 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1AO00322 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1AO00322 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1AO00322 IL6STP1-201ENST00000346911 1020 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 RN7SKP104-201ENST00000362605 328 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 MIR195-201ENST00000385194 87 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
UPK1AO00322 AP002530.1-201ENST00000405705 684 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 RNA5SP345-201ENST00000410646 108 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 RN7SKP213-201ENST00000410746 298 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 DPPA2P3-201ENST00000411853 655 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
UPK1AO00322 Z68694.1-201ENST00000413929 841 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.57□□□□□ -1.68
UPK1AO00322 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.57□□□□□ -1.68
UPK1AO00322 RPL7P11-201ENST00000437586 658 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.57□□□□□ -1.68
UPK1AO00322 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.57□□□□□ -1.68
UPK1AO00322 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.57□□□□□ -1.68
UPK1AO00322 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.57□□□□□ -1.68
UPK1AO00322 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.57□□□□□ -1.68
UPK1AO00322 RN7SL591P-201ENST00000496150 292 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.57□□□□□ -1.68
UPK1AO00322 AL671862.1-201ENST00000515851 349 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.57□□□□□ -1.68
UPK1AO00322 RN7SL52P-201ENST00000584271 284 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.57□□□□□ -1.68
UPK1AO00322 EIF3FP1-201ENST00000613970 806 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 AC140113.4-201ENST00000622087 222 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.57□□□□□ -1.68
UPK1AO00322 AL355480.1-201ENST00000629041 99 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 AL359922.3-201ENST00000624779 1670 ntBASIC4.57□□□□□ -1.68
UPK1AO00322 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1AO00322 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1AO00322 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UPK1AO00322 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
UPK1AO00322 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.56□□□□□ -1.68
UPK1AO00322 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
UPK1AO00322 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
UPK1AO00322 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
UPK1AO00322 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.56□□□□□ -1.68
UPK1AO00322 RNA5SP507-201ENST00000363603 121 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 SNORA70-201ENST00000384436 135 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 CHMP1B2P-201ENST00000399581 597 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.56□□□□□ -1.68
UPK1AO00322 GTF2IP5-201ENST00000414608 731 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.56□□□□□ -1.68
UPK1AO00322 RPL23AP27-201ENST00000415161 451 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 OR13Z1P-201ENST00000416141 834 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 NPM1P22-201ENST00000427761 952 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.56□□□□□ -1.68
UPK1AO00322 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms