Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 RLIMP2-201ENST00000427891 1563 ntBASIC4.91□□□□□ -1.62
PDLIM1O00151 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDLIM1O00151 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.9□□□□□ -1.62
PDLIM1O00151 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.9□□□□□ -1.62
PDLIM1O00151 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.9□□□□□ -1.62
PDLIM1O00151 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.9□□□□□ -1.62
PDLIM1O00151 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
PDLIM1O00151 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
PDLIM1O00151 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDLIM1O00151 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDLIM1O00151 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDLIM1O00151 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.9□□□□□ -1.62
PDLIM1O00151 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PDLIM1O00151 RNA5SP513-201ENST00000364648 118 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 RNA5SP223-201ENST00000365174 120 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 MIR551A-201ENST00000385042 96 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 GABARAPL3-201ENST00000412799 354 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 AL513325.1-201ENST00000417716 1034 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 AC004448.2-201ENST00000422360 586 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDLIM1O00151 AC012075.1-201ENST00000436549 580 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 AL390119.1-201ENST00000440329 312 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 RAD1P2-201ENST00000446414 663 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 AC104306.1-201ENST00000449702 371 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 C1DP3-201ENST00000455013 423 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.9□□□□□ -1.63
PDLIM1O00151 AC058823.1-201ENST00000485315 474 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 MTND6P2-201ENST00000512226 524 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 RNA5SP362-201ENST00000516048 118 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.9□□□□□ -1.63
PDLIM1O00151 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PDLIM1O00151 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM1O00151 AP004607.2-201ENST00000533949 322 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PDLIM1O00151 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM1O00151 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM1O00151 RPL21P7-201ENST00000557463 483 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.9□□□□□ -1.63
PDLIM1O00151 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM1O00151 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.9□□□□□ -1.63
PDLIM1O00151 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM1O00151 AC090953.1-201ENST00000604305 1092 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 MIR6768-201ENST00000610734 72 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.9□□□□□ -1.63
PDLIM1O00151 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDLIM1O00151 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDLIM1O00151 AL606537.1-201ENST00000607258 2011 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDLIM1O00151 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDLIM1O00151 AC108751.5-201ENST00000492880 1336 ntBASIC4.9□□□□□ -1.63
PDLIM1O00151 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDLIM1O00151 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDLIM1O00151 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDLIM1O00151 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PDLIM1O00151 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.89□□□□□ -1.63
PDLIM1O00151 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM1O00151 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.89□□□□□ -1.63
PDLIM1O00151 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM1O00151 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.89□□□□□ -1.63
PDLIM1O00151 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PDLIM1O00151 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM1O00151 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM1O00151 RNU6-697P-201ENST00000363348 107 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 RNA5SP234-201ENST00000363916 119 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 RN7SKP6-201ENST00000364795 319 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM1O00151 HSPD1P16-201ENST00000402302 394 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 AP000580.1-201ENST00000404439 358 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 U3.32-201ENST00000408116 212 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM1O00151 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.89□□□□□ -1.63
PDLIM1O00151 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.89□□□□□ -1.63
PDLIM1O00151 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.89□□□□□ -1.63
PDLIM1O00151 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.89□□□□□ -1.63
PDLIM1O00151 RPL7AP61-201ENST00000443410 636 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 MRPL35P2-201ENST00000448009 511 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 BX842559.2-201ENST00000451418 605 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.89□□□□□ -1.63
PDLIM1O00151 RPL23AP2-201ENST00000471227 466 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.89□□□□□ -1.63
PDLIM1O00151 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.89□□□□□ -1.63
PDLIM1O00151 AC027308.1-201ENST00000517993 110 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.89□□□□□ -1.63
PDLIM1O00151 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.89□□□□□ -1.63
PDLIM1O00151 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.89□□□□□ -1.63
PDLIM1O00151 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM1O00151 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM1O00151 MIR4675-201ENST00000577898 77 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.89□□□□□ -1.63
PDLIM1O00151 IMMP1LP1-201ENST00000605170 488 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM1O00151 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.89□□□□□ -1.63
PDLIM1O00151 AL118522.2-201ENST00000616045 615 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 MIR6729-201ENST00000618194 65 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 AL356121.2-201ENST00000624715 780 ntBASIC4.89□□□□□ -1.63
PDLIM1O00151 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.89□□□□□ -1.63
PDLIM1O00151 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.89□□□□□ -1.63
PDLIM1O00151 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM1O00151 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms