Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC104971.1-201ENST00000495117 578 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AC027026.1-201ENST00000532323 742 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AP000919.1-201ENST00000582850 985 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 MIR4691-201ENST00000583764 85 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 IMMP1LP3-201ENST00000604197 224 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AL034374.2-201ENST00000605281 548 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AL359757.1-201ENST00000623176 255 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AL353662.3-201ENST00000625131 237 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 AL121950.1-201ENST00000624993 2077 ntBASIC4.79□□□□□ -1.64
TRIM49D1C9J1S8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 THAP12P4-201ENST00000528321 2266 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 RN7SKP162-201ENST00000363605 345 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 RN7SKP160-201ENST00000363804 340 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 MIR195-201ENST00000385194 87 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 OR2AM1P-201ENST00000422137 422 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 NPM1P33-201ENST00000438918 872 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 AC104651.2-201ENST00000447549 528 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 MRPS33P2-201ENST00000507850 322 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 RPL7L1P4-201ENST00000513004 707 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 AC011447.4-201ENST00000587562 111 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 AC005520.3-201ENST00000602874 370 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 AL121932.1-201ENST00000605542 214 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 AL512329.2-201ENST00000607350 548 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 AC022467.1-201ENST00000614738 749 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 uc_338.18-201ENST00000615451 175 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 SMG1P6-201ENST00000532337 2930 ntBASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM49D1C9J1S8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 TLK1P1-201ENST00000456760 2440 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 AP001273.1-201ENST00000624493 3152 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 SNORA70-201ENST00000384436 135 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 TRAV35-201ENST00000390462 330 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 Z97832.1-201ENST00000402490 328 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 PPIAP13-201ENST00000434706 478 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 RPL23AP56-201ENST00000460778 453 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 RN7SL222P-201ENST00000476452 299 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 RPL5P22-201ENST00000480199 884 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 TCP11X3P-202ENST00000514289 1254 ntBASIC4.77□□□□□ -1.65
TRIM49D1C9J1S8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms