Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRBV5-4A0A0C4DH59 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV5-4A0A0C4DH59 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV5-4A0A0C4DH59 AL034370.1-201ENST00000397254 1590 ntBASIC4.81□□□□□ -1.64
TRBV5-4A0A0C4DH59 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV5-4A0A0C4DH59 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRBV5-4A0A0C4DH59 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AL731532.2-201ENST00000623542 1953 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 ZNF652P1-201ENST00000442420 1309 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 IRF5P1-201ENST00000504852 2164 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 U3.30-201ENST00000391308 210 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 U3.35-201ENST00000408405 208 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 LINC00993-201ENST00000420453 540 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 RGS17P1-201ENST00000423358 553 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 EIF4HP2-201ENST00000424380 563 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 CKS1BP6-201ENST00000424932 240 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 NDUFA5P1-201ENST00000433858 341 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 TPRKBP1-201ENST00000456243 481 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 snoU13.20-201ENST00000459180 104 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 RPL7P16-201ENST00000479738 738 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 NPM1P21-201ENST00000513394 762 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 RNA5SP249-201ENST00000516127 99 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 BUD31P1-201ENST00000521828 359 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC005000.1-201ENST00000536192 288 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 LSM3P2-201ENST00000551246 273 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 RN7SL802P-201ENST00000577858 299 ntBASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRBV5-4A0A0C4DH59 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC112198.2-201ENST00000426589 6996 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AL672167.1-204ENST00000641875 3017 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AL645733.1-201ENST00000402250 217 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 CTSL3P-202ENST00000412179 788 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 COX6B1P1-201ENST00000415962 213 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 RPS26P13-201ENST00000419030 330 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AL451139.1-201ENST00000434718 346 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 SUMO2P1-206ENST00000445436 284 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 RHEBP2-201ENST00000450289 600 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 OR52J1P-201ENST00000450596 932 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 HIGD1AP8-201ENST00000453927 274 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC025181.1-201ENST00000477507 416 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 HMGB3P16-201ENST00000508037 287 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AP002981.1-201ENST00000517692 975 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AC009117.1-201ENST00000563948 554 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 BGLT3-201ENST00000564523 994 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 AL022393.1-201ENST00000625142 1677 ntBASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
TRBV5-4A0A0C4DH59 OR51C1P-202ENST00000641159 1444 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms