Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 HAUS8P1-201ENST00000549005 542 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC007342.5-201ENST00000571340 2142 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 RN7SL802P-201ENST00000577858 299 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 MIR5699-201ENST00000578903 90 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC022726.1-201ENST00000587475 207 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC130352.1-201ENST00000602979 661 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 COX6CP4-201ENST00000605798 228 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AP001521.2-201ENST00000608772 546 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 MIR6826-201ENST00000617808 98 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 AC104260.2-201ENST00000623551 3497 ntBASIC4.29□□□□□ -1.72
TRAV27A0A087WT01 C4BPAP1-201ENST00000415474 1893 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 HMGB3P7-201ENST00000400214 611 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 AL645608.4-201ENST00000423619 154 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 AC112498.1-201ENST00000444401 332 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 AC104651.2-201ENST00000447549 528 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 AC073850.1-201ENST00000449243 255 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 AC016724.1-201ENST00000453215 421 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 SEPT7P3-201ENST00000455017 621 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 AC091868.1-201ENST00000508746 304 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 RNA5SP34-201ENST00000516887 130 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 GCSHP4-201ENST00000538792 439 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 CR381572.2-201ENST00000624852 397 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRAV27A0A087WT01 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 SAMMSON-226ENST00000642089 1582 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 MIR765-201ENST00000390226 114 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 SNORA11.3-201ENST00000408471 128 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 AC114755.2-201ENST00000413520 361 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 OR2AM1P-201ENST00000422137 422 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 PRPF38AP2-201ENST00000438179 851 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 RN7SL727P-201ENST00000482164 296 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 AC015912.2-201ENST00000571053 181 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 SNORD91B-202ENST00000608459 222 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 FAM27B-201ENST00000610601 213 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 SNORA11.6-201ENST00000619030 128 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 AC011815.3-201ENST00000624194 473 ntBASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.27□□□□□ -1.73
TRAV27A0A087WT01 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms