Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AL133268.1-201ENST00000405676 1401 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 AC063976.2-201ENST00000425667 3556 ntBASIC3.77□□□□□ -1.81
HLA-DRB4X5D2U9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 XKRY2-202ENST00000623874 1581 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 XKRY-202ENST00000624960 1581 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AL590763.1-201ENST00000398297 1545 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AL121834.1-202ENST00000404494 277 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 U3.32-201ENST00000408116 212 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 RPL21P108-201ENST00000413857 481 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AL355433.1-201ENST00000422804 300 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 GTF2IP2-201ENST00000424290 697 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC013410.1-201ENST00000436223 1232 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AURKAPS1-201ENST00000451805 1212 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 RPL7AP28-201ENST00000464513 571 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 RPS26P39-201ENST00000469206 341 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 RN7SL222P-201ENST00000476452 299 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 NIP7P2-201ENST00000485801 544 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC021146.3-201ENST00000511911 260 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC021733.2-201ENST00000518830 497 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 MIR1269B-201ENST00000580405 75 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 MIR6886-201ENST00000619864 61 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC079298.2-201ENST00000623885 459 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 AC104118.1-201ENST00000607625 1589 ntBASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DRB4X5D2U9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 NXF4-202ENST00000416098 1465 ntBASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 RNU1-94P-201ENST00000362627 173 ntBASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 SNORA66-201ENST00000384792 133 ntBASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 RPS24P12-201ENST00000402084 394 ntBASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 RPS26P4-201ENST00000431743 355 ntBASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 RPS29P9-201ENST00000440360 171 ntBASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 RPL7L1P1-201ENST00000448259 785 ntBASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 NDUFA5P8-201ENST00000449019 346 ntBASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 AC108751.2-201ENST00000469993 231 ntBASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 RPS18P6-201ENST00000476880 458 ntBASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.75□□□□□ -1.81
HLA-DRB4X5D2U9 STMN1P2-201ENST00000508435 439 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms