Protein–RNA interactions for Protein: Q9UMW8

USP18, Ubl carboxyl-terminal hydrolase 18, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP18Q9UMW8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 RNU6-224P-201ENST00000384055 107 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 FCF1P5-201ENST00000406490 482 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 RPL37P18-201ENST00000411602 243 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 RPS4XP16-201ENST00000427198 791 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 NANOGP2-201ENST00000435391 727 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 PA2G4P6-201ENST00000438325 1197 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 KRT8P51-201ENST00000438938 274 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 HMGB3P6-201ENST00000444896 598 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 MTND1P29-201ENST00000448112 647 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 GEMIN2P1-201ENST00000454246 752 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC244505.3-201ENST00000454598 187 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC005410.1-202ENST00000460347 485 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC108693.1-201ENST00000496068 432 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 SNORA70.20-201ENST00000516848 126 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC024940.4-201ENST00000605507 246 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC145423.1-201ENST00000605712 336 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC011374.2-201ENST00000607135 526 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AL136131.3-201ENST00000607600 188 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC009318.3-201ENST00000616916 503 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC027279.4-201ENST00000624371 2072 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 MTCO1P18-201ENST00000455518 1419 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC005261.2-201ENST00000593427 4258 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 AC020656.2-201ENST00000613291 5309 ntBASIC6.14□□□□□ -1.43
USP18Q9UMW8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP18Q9UMW8 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.14□□□□□ -1.43
USP18Q9UMW8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP18Q9UMW8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP18Q9UMW8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP18Q9UMW8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.13□□□□□ -1.43
USP18Q9UMW8 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.13□□□□□ -1.43
USP18Q9UMW8 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP18Q9UMW8 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
USP18Q9UMW8 AC017079.1-201ENST00000333650 415 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP18Q9UMW8 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP18Q9UMW8 Y_RNA.578-201ENST00000390903 88 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 SNORD65C-201ENST00000390962 71 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 RNA5SP105-201ENST00000391123 113 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 AC016739.1-201ENST00000405359 345 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 RN7SKP59-201ENST00000410520 314 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 HMGB3P31-201ENST00000413333 595 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 MFSD13B-201ENST00000420133 1290 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.13□□□□□ -1.43
USP18Q9UMW8 AC090960.1-201ENST00000421072 306 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.13□□□□□ -1.43
USP18Q9UMW8 AL034379.1-201ENST00000423216 253 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 AC093084.1-201ENST00000424233 687 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.13□□□□□ -1.43
USP18Q9UMW8 AL590399.2-201ENST00000427536 309 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.13□□□□□ -1.43
USP18Q9UMW8 VN1R110P-201ENST00000438988 971 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.13□□□□□ -1.43
USP18Q9UMW8 OTX2P1-201ENST00000450956 354 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 ART2BP-201ENST00000453501 499 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 MRPL35P4-201ENST00000453682 566 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 AL445669.2-201ENST00000454425 421 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 TPTE2P5-203ENST00000458118 728 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 snoU13.29-201ENST00000459370 104 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.13□□□□□ -1.43
USP18Q9UMW8 AC109464.1-201ENST00000511091 819 ntBASIC6.13□□□□□ -1.43
USP18Q9UMW8 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.13□□□□□ -1.43
USP18Q9UMW8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP18Q9UMW8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.13□□□□□ -1.43
USP18Q9UMW8 AC006518.2-201ENST00000542513 940 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms