Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC099654.2-201ENST00000433031 1980 ntBASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS29Q9UBQ0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 AC104260.2-201ENST00000623551 3497 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 RN7SKP74-201ENST00000362849 309 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 GTF2IP5-201ENST00000414608 731 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 AC092647.3-201ENST00000443044 633 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 EEF1B2P5-201ENST00000444820 548 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 RPL23AP56-201ENST00000460778 453 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 AC005532.2-201ENST00000467154 373 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 AC006499.3-201ENST00000506077 748 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 RNA5SP392-201ENST00000516905 112 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 OR10G5P-201ENST00000532733 358 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 CR381572.2-201ENST00000624852 397 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 ZNF652P1-201ENST00000442420 1309 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 HSPA8P18-201ENST00000439846 1928 ntBASIC4.64□□□□□ -1.67
VPS29Q9UBQ0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 SMG1P6-201ENST00000532337 2930 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AC093591.2-201ENST00000565254 3843 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 SNORA51.1-201ENST00000363243 140 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 MIR765-201ENST00000390226 114 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 CHMP1B2P-201ENST00000399581 597 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AL592291.1-201ENST00000403830 352 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 VN1R37P-201ENST00000419096 748 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AC093162.1-201ENST00000419682 124 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 RPS17P8-201ENST00000434525 335 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 RPL7P11-201ENST00000437586 658 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 MYO5BP2-201ENST00000449815 1277 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 RNA5SP103-201ENST00000459503 118 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AC112206.1-201ENST00000468416 477 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 RNF138P2-201ENST00000603490 592 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 MIR6729-201ENST00000618194 65 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 AL022401.1-201ENST00000619498 108 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 MIR6886-201ENST00000619864 61 ntBASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS29Q9UBQ0 SALL4P2-201ENST00000423288 2910 ntBASIC4.62□□□□□ -1.67
VPS29Q9UBQ0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS29Q9UBQ0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
VPS29Q9UBQ0 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS29Q9UBQ0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS29Q9UBQ0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS29Q9UBQ0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VPS29Q9UBQ0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VPS29Q9UBQ0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS29Q9UBQ0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms